Publications

2016

Bunk EC, Ertaylan G, Ortega F, Pavlou MA, Gonzalez Cano L, Stergiopoulos A, Safaiyan S, Völs S, van Cann M, Politis PK, Simons M, Berninger B, Del Sol A, Schwamborn JC (2016) Prox1 Is Required for Oligodendrocyte Cell Identity in Adult Neural Stem Cells of the Subventricular Zone. Stem Cells

Sahu SK, Fritz A, Tiwari N, Kovacs Z, Pouya A, Wüllner V, Bora P, Schacht T, Baumgart J, Peron S, Berninger B, Tiwari VK, Methner A (2016) TOX3 regulates neural progenitor identity. Biochim Biophys Acta

Berninger B, Jessberger S (2016) Engineering of Adult Neurogenesis and Gliogenesis. Cold Spring Harb Perspect Biol

Thakurela S, Tiwari N, Schick S, Garding A, Ivanek R, Berninger B, Tiwari VK (2016) Mapping gene regulatory circuitry of Pax6 during neurogenesis. Cell Discov

McAvoy KM, Scobie KN, Berger S, Russo C, Guo N, Decharatanachart P, Vega-Ramirez H, Miake-Lye S, Whalen M, Nelson M, Bergami M, Bartsch D, Hen R, Berninger B, Sahay A (2016) Modulating Neuronal Competition Dynamics in the Dentate Gyrus to Rejuvenate Aging Memory Circuits. Neuron

Kleiderman S, Gutbier S, Ugur Tufekci K, Ortega F, Sá JV, Teixeira AP, Brito C, Glaab E, Berninger B, Alves PM, Leist M (2016) Conversion of Nonproliferating Astrocytes into Neurogenic Neural Stem Cells: Control by FGF2 and Interferon-?. Stem Cells

Shone V, Oulion S, Casane D, Laurenti P, Graham A (2016) Mode of reduction in the number of pharyngeal segments within the sarcopterygians. Zoological Lett

Poopalasundaram S, Chambers D, Graham A, Bouloux PM (2016) Serotonin Receptor 1A (HTR1A), a Novel Regulator of GnRH Neuronal Migration in Chick Embryo. Endocrinology

Koudelka S, Voas MG, Almeida RG, Baraban M, Soetaert J, Meyer MP, Talbot WS, Lyons DA (2016) Individual Neuronal Subtypes Exhibit Diversity in CNS Myelination Mediated by Synaptic Vesicle Release. Curr Biol

Stiber JA, Wu JH, Zhang L, Nepliouev I, Zhang ZS, Bryson VG, Brian L, Bentley RC, Gordon-Weeks PR, Rosenberg PB, Freedman NJ (2016) The Actin-Binding Protein Drebrin Inhibits Neointimal Hyperplasia. Arterioscler Thromb Vasc Biol

Kiecker C (2016) The chick embryo as a model for the effects of prenatal exposure to alcohol on craniofacial development. Dev Biol

Millan MJ, Andrieux A, Bartzokis G, Cadenhead K, Dazzan P, Fusar-Poli P, Gallinat J, Giedd J, Grayson DR, Heinrichs M, Kahn R, Krebs MO, Leboyer M, Lewis D, Marin O, Marin P, Meyer-Lindenberg A, McGorry P, McGuire P, Owen MJ, Patterson P, Sawa A, Spedding M, Uhlhaas P, Vaccarino F, Wahlestedt C, Weinberger D (2016) Altering the course of schizophrenia: progress and perspectives. Nat Rev Drug Discov

Glebov OO, Cox S, Humphreys L, Burrone J (2016) Neuronal activity controls transsynaptic geometry. Sci Rep

Marques-Smith A, Favuzzi E, Rico B (2016) Shaping Early Networks to Rule Mature Circuits: Little MiRs Go a Long Way. Neuron

Wefelmeyer W, Puhl CJ, Burrone J (2016) Homeostatic Plasticity of Subcellular Neuronal Structures: From Inputs to Outputs. Trends Neurosci

Jackson RE, Burrone J (2016) Visualizing Presynaptic Calcium Dynamics and Vesicle Fusion with a Single Genetically Encoded Reporter at Individual Synapses. Front Synaptic Neurosci

Gordon-Weeks PR (2016) The role of the drebrin/EB3/Cdk5 pathway in dendritic spine plasticity, implications for Alzheimer's disease. Brain Res Bull

Herrera CG, Ponomarenko A, Korotkova T, Burdakov D, Adamantidis A (2016) Sleep & metabolism: The multitasking ability of lateral hypothalamic inhibitory circuitries. Front Neuroendocrinol

Dumitrescu AS, Evans MD, Grubb MS (2016) Evaluating Tools for Live Imaging of Structural Plasticity at the Axon Initial Segment. Front Cell Neurosci

Marín O (2016) Developmental timing and critical windows for the treatment of psychiatric disorders. Nat Med

Grubb MS, Hoogenraad CC, Schwabe L, López-Bendito G (2016) Moving on: mobility for early-career neuroscientists. Eur J Neurosci

González JA, Jensen LT, Iordanidou P, Strom M, Fugger L, Burdakov D (2016) Inhibitory Interplay between Orexin Neurons and Eating. Curr Biol

Kiecker C, Bates T, Bell E (2016) Molecular specification of germ layers in vertebrate embryos. Cell Mol Life Sci

Antinucci P, Suleyman O, Monfries C, Hindges R (2016) Neural Mechanisms Generating Orientation Selectivity in the Retina. Curr Biol

Yap K, Xiao Y, Friedman BA, Je HS, Makeyev EV (2016) Polarizing the Neuron through Sustained Co-expression of Alternatively Spliced Isoforms. Cell Rep

Panousopoulou E, Hobbs C, Mason I, Green JB, Formstone CJ (2016) Epiboly generates the epidermal basal monolayer and spreads the nascent mammalian skin to enclose the embryonic body. J Cell Sci

Qian X, Hamid FM, El Sahili A, Darwis DA, Wong YH, Bhushan S, Makeyev EV, Lescar J (2016) Functional Evolution in Orthologous Cell-encoded RNA-dependent RNA Polymerases. J Biol Chem

Spires-Jones TL, Poirazi P, Grubb MS (2016) Opening up: open access publishing, data sharing, and how they can influence your neuroscience career. Eur J Neurosci

Araya C, Carmona-Fontaine C, Clarke JD (2016) Extracellular matrix couples the convergence movements of mesoderm and neural plate during the early stages of neurulation. Dev Dyn

Leto K, Arancillo M, Becker EB, Buffo A, Chiang C, Ding B, Dobyns WB, Dusart I, Haldipur P, Hatten ME, Hoshino M, Joyner AL, Kano M, Kilpatrick DL, Koibuchi N, Marino S, Martinez S, Millen KJ, Millner TO, Miyata T, Parmigiani E, Schilling K, Sekerková G, Sillitoe RV, Sotelo C, Uesaka N, Wefers A, Wingate RJ, Hawkes R (2016) Consensus Paper: Cerebellar Development. Cerebellum

Delbaere J, Van Herck SL, Bourgeois NM, Vancamp P, Yang S, Wingate RJ, Darras VM (2016) Mosaic Expression of Thyroid Hormone Regulatory Genes Defines Cell Type-Specific Dependency in the Developing Chicken Cerebellum. Cerebellum

Leiwe MN, Hendry AC, Bard AD, Eglen SJ, Lowe AS, Thompson ID (2016) Geniculo-Cortical Projection Diversity Revealed within the Mouse Visual Thalamus. PLoS One

Cate MS, Gajendra S, Alsbury S, Raabe T, Tear G, Mitchell KJ (2016) Mushroom body defect is required in parallel to Netrin for midline axon guidance in Drosophila. Development

Kawaguchi D, Sahara S, Zembrzycki A, O'Leary DDM (2016) Generation and analysis of an improved Foxg1-IRES-Cre driver mouse line. Dev Biol

Shepherd D, Harris R, Williams DW, Truman JW (2016) Postembryonic lineages of the Drosophila ventral nervous system: Neuroglian expression reveals the adult hemilineage associated fiber tracts in the adult thoracic neuromeres. J Comp Neurol

Buckley CE, Moore RE, Reade A, Goldberg AR, Weiner OD, Clarke JD (2016) Reversible Optogenetic Control of Subcellular Protein Localization in a Live Vertebrate Embryo. Dev Cell

2015

Kostadinov D, Sanes JR (2015) Protocadherin-dependent dendritic self-avoidance regulates neural connectivity and circuit function. Elife

Kiecker C (2015) WNT Takes Centre Stage in Border Control. EBioMedicine

Bergami M, Masserdotti G, Temprana SG, Motori E, Eriksson TM, Göbel J, Yang SM, Conzelmann KK, Schinder AF, Götz M, Berninger B (2015) A critical period for experience-dependent remodeling of adult-born neuron connectivity. Neuron

Raposo AA, Vasconcelos FF, Drechsel D, Marie C, Johnston C, Dolle D, Bithell A, Gillotin S, van den Berg DL, Ettwiller L, Flicek P, Crawford GE, Parras CM, Berninger B, Buckley NJ, Guillemot F, Castro DS (2015) Ascl1 Coordinately Regulates Gene Expression and the Chromatin Landscape during Neurogenesis. Cell Rep

Masserdotti G, Gillotin S, Sutor B, Drechsel D, Irmler M, Jørgensen HF, Sass S, Theis FJ, Beckers J, Berninger B, Guillemot F, Götz M (2015) Transcriptional Mechanisms of Proneural Factors and REST in Regulating Neuronal Reprogramming of Astrocytes. Cell Stem Cell

Sahu SK, Garding A, Tiwari N, Thakurela S, Toedling J, Gebhard S, Ortega F, Schmarowski N, Berninger B, Nitsch R, Schmidt M, Tiwari VK (2015) JNK-dependent gene regulatory circuitry governs mesenchymal fate. EMBO J

Aravantinou-Fatorou K, Ortega F, Chroni-Tzartou D, Antoniou N, Poulopoulou C, Politis PK, Berninger B, Matsas R, Thomaidou D (2015) CEND1 and NEUROGENIN2 Reprogram Mouse Astrocytes and Embryonic Fibroblasts to Induced Neural Precursors and Differentiated Neurons. Stem Cell Reports

Heinrich C, Spagnoli FM, Berninger B (2015) In vivo reprogramming for tissue repair. Nat Cell Biol

Péron S, Berninger B (2015) Imported Stem Cells Strike against Stroke. Cell Stem Cell

Chen G, Wernig M, Berninger B, Nakafuku M, Parmar M, Zhang CL (2015) In Vivo Reprogramming for Brain and Spinal Cord Repair. eNeuro

Anderson GW, Deans PJ, Taylor RD, Raval P, Chen D, Lowder H, Murkerji S, Andreae LC, Williams BP, Srivastava DP (2015) Characterisation of neurons derived from a cortical human neural stem cell line CTX0E16. Stem Cell Res Ther

Poort J, Khan AG, Pachitariu M, Nemri A, Orsolic I, Krupic J, Bauza M, Sahani M, Keller GB, Mrsic-Flogel TD, Hofer SB (2015) Learning Enhances Sensory and Multiple Non-sensory Representations in Primary Visual Cortex. Neuron

Hannon E, Chand AN, Evans MD, Wong CC, Grubb MS, Mill J (2015) A role for CaV1 and calcineurin signaling in depolarization-induced changes in neuronal DNA methylation. Neuroepigenetics

Mockenhaupt S, Makeyev EV (2015) Non-coding functions of alternative pre-mRNA splicing in development. Semin Cell Dev Biol

Nikolaou N, Meyer MP (2015) Neurobiology: imaging prey capture circuits in zebrafish. Curr Biol

Hanzel M, Wingate RJ, Butts T (2015) Ex Vivo Culture of Chick Cerebellar Slices and Spatially Targeted Electroporation of Granule Cell Precursors. J Vis Exp

Zembrzycki A, Stocker AM, Leingärtner A, Sahara S, Chou SJ, Kalatsky V, May SR, Stryker MP, O'Leary DD (2015) Genetic mechanisms control the linear scaling between related cortical primary and higher order sensory areas. Elife

An W, Jackson RE, Hunter P, Gögel S, van Diepen M, Liu K, Meyer MP, Eickholt BJ (2015) Engineering FKBP-Based Destabilizing Domains to Build Sophisticated Protein Regulation Systems. PLoS One

Wasserman SM, Aptekar JW, Lu P, Nguyen J, Wang AL, Keles MF, Grygoruk A, Krantz DE, Larsen C, Frye MA (2015) Olfactory neuromodulation of motion vision circuitry in Drosophila. Curr Biol

Slater G, Levy P, Chan KL, Larsen C (2015) A central neural pathway controlling odor tracking in Drosophila. J Neurosci

Nikolaou N, Meyer MP (2015) Lamination Speeds the Functional Development of Visual Circuits. Neuron

Loncle N, Agromayor M, Martin-Serrano J, Williams DW (2015) An ESCRT module is required for neuron pruning. Sci Rep

Wefelmeyer W, Cattaert D, Burrone J (2015) Activity-dependent mismatch between axo-axonic synapses and the axon initial segment controls neuronal output. Proc Natl Acad Sci U S A

Patel AX, Burdakov D (2015) Mechanisms of gain control by voltage-gated channels in intrinsically-firing neurons. PLoS One

Dai W, Li W, Hoque M, Li Z, Tian B, Makeyev EV (2015) A post-transcriptional mechanism pacing expression of neural genes with precursor cell differentiation status. Nat Commun

Apergis-Schoute J, Iordanidou P, Faure C, Jego S, Schöne C, Aitta-Aho T, Adamantidis A, Burdakov D (2015) Optogenetic evidence for inhibitory signaling from orexin to MCH neurons via local microcircuits. J Neurosci

Chand AN, Galliano E, Chesters RA, Grubb MS (2015) A distinct subtype of dopaminergic interneuron displays inverted structural plasticity at the axon initial segment. J Neurosci

Tyson AL, Hilton ST, Andreae LC (2015) Rapid, simple and inexpensive production of custom 3D printed equipment for large-volume fluorescence microscopy. Int J Pharm

Missaire M, Hindges R (2015) The role of cell adhesion molecules in visual circuit formation: from neurite outgrowth to maps and synaptic specificity. Dev Neurobiol

Hunter PR, Hendry AC, Lowe AS (2015) Zebrafish brain mapping--standardized spaces, length scales, and the power of N and n. Dev Neurobiol

Evans MD, Dumitrescu AS, Kruijssen DL, Taylor SE, Grubb MS (2015) Rapid Modulation of Axon Initial Segment Length Influences Repetitive Spike Firing. Cell Rep

Andreae LC, Burrone J (2015) Spontaneous Neurotransmitter Release Shapes Dendritic Arbors via Long-Range Activation of NMDA Receptors. Cell Rep

Entchev EV, Patel DS, Zhan M, Steele AJ, Lu H, Ch'ng Q (2015) A gene-expression-based neural code for food abundance that modulates lifespan. Elife

Dehorter N, Ciceri G, Bartolini G, Lim L, del Pino I, Marín O (2015) Tuning of fast-spiking interneuron properties by an activity-dependent transcriptional switch. Science

Sonego M, Oberoi M, Stoddart J, Gajendra S, Hendricusdottir R, Oozeer F, Worth DC, Hobbs C, Eickholt BJ, Gordon-Weeks PR, Doherty P, Lalli G (2015) Drebrin regulates neuroblast migration in the postnatal Mammalian brain. PLoS One

2014

Irimia M, Weatheritt RJ, Ellis JD, Parikshak NN, Gonatopoulos-Pournatzis T, Babor M, Quesnel-Vallières M, Tapial J, Raj B, O'Hanlon D, Barrios-Rodiles M, Sternberg MJ, Cordes SP, Roth FP, Wrana JL, Geschwind DH, Blencowe BJ (2014) A highly conserved program of neuronal microexons is misregulated in autistic brains. Cell

Nelson AC, Cutty SJ, Niini M, Stemple DL, Flicek P, Houart C, Bruce AE, Wardle FC (2014) Global identification of Smad2 and Eomesodermin targets in zebrafish identifies a conserved transcriptional network in mesendoderm and a novel role for Eomesodermin in repression of ectodermal gene expression. BMC Biol

Long KR, Ffrench-Constant C (2014) Neural stem cell quiescence comes to an un-sticky end. Nat Cell Biol

Arlotta P, Berninger B (2014) Brains in metamorphosis: reprogramming cell identity within the central nervous system. Curr Opin Neurobiol

Karow M, Schichor C, Beckervordersandforth R, Berninger B (2014) Lineage-reprogramming of pericyte-derived cells of the adult human brain into induced neurons. J Vis Exp

Heinrich C, Bergami M, Gascón S, Lepier A, Viganò F, Dimou L, Sutor B, Berninger B, Götz M (2014) Sox2-mediated conversion of NG2 glia into induced neurons in the injured adult cerebral cortex. Stem Cell Reports

Andreae LC, Burrone J (2014) The role of neuronal activity and transmitter release on synapse formation. Curr Opin Neurobiol

Buckley C, Clarke J (2014) Establishing the plane of symmetry for lumen formation and bilateral brain formation in the zebrafish neural rod. Semin Cell Dev Biol

Zakaria S, Mao Y, Kuta A, de Sousa CF, Gaufo GO, McNeill H, Hindges R, Guthrie S, Irvine KD, Francis-West PH (2014) Regulation of neuronal migration by Dchs1-Fat4 planar cell polarity. Curr Biol

Astick M, Tubby K, Mubarak WM, Guthrie S, Price SR (2014) Central topography of cranial motor nuclei controlled by differential cadherin expression. Curr Biol

Neo WH, Yap K, Lee SH, Looi LS, Khandelia P, Neo SX, Makeyev EV, Su IH (2014) MicroRNA miR-124 controls the choice between neuronal and astrocyte differentiation by fine-tuning Ezh2 expression. J Biol Chem

Jain N, Lim LW, Tan WT, George B, Makeyev E, Thanabalu T (2014) Conditional N-WASP knockout in mouse brain implicates actin cytoskeleton regulation in hydrocephalus pathology. Exp Neurol

Abbas F, Meyer MP (2014) Fish vision: size selectivity in the zebrafish retinotectal pathway. Curr Biol

Kosse C, Burdakov D (2014) A unifying computational framework for stability and flexibility of arousal. Front Syst Neurosci

Marklund U, Alekseenko Z, Andersson E, Falci S, Westgren M, Perlmann T, Graham A, Sundström E, Ericson J (2014) Detailed expression analysis of regulatory genes in the early developing human neural tube. Stem Cells Dev

Dyer C, Linker C, Graham A, Knight R (2014) Specification of sensory neurons occurs through diverse developmental programs functioning in the brain and spinal cord. Dev Dyn

Aigner S, Heckel T, Zhang JD, Andreae LC, Jagasia R (2014) Human pluripotent stem cell models of autism spectrum disorder: emerging frontiers, opportunities, and challenges towards neuronal networks in a dish. Psychopharmacology (Berl)

Hamid FM, Makeyev EV (2014) Regulation of mRNA abundance by polypyrimidine tract-binding protein-controlled alternate 5' splice site choice. PLoS Genet

Tripathi VB, Baskaran P, Shaw CE, Guthrie S (2014) Tar DNA-binding protein-43 (TDP-43) regulates axon growth in vitro and in vivo. Neurobiol Dis

Araya C, Tawk M, Girdler GC, Costa M, Carmona-Fontaine C, Clarke JD (2014) Mesoderm is required for coordinated cell movements within zebrafish neural plate in vivo. Neural Dev