Publications

2017

Clarke J, Gillingwater T, Graham A, Milz S (2017) Editorial - Journal of Anatomy January 2017. J Anat 230: 1-3

Wright R, Newey SE, Ilie A, Wefelmeyer W, Raimondo JV, Ginham R, Mcllhinney RAJ, Akerman CJ (2017) Neuronal Chloride Regulation via KCC2 Is Modulated through a GABAB Receptor Protein Complex. J Neurosci 37: 5447-5462
Heide M, Long KR, Huttner WB (2017) Novel gene function and regulation in neocortex expansion. Curr Opin Cell Biol 49: 22-30
Hamid FM, Makeyev EV (2017) A mechanism underlying position-specific regulation of alternative splicing. Nucleic Acids Res 45: 12455-12468
Patel DS, Diana G, Entchev EV, Zhan M, Lu H, Ch'ng Q (2017) Quantification of Information Encoded by Gene Expression Levels During Lifespan Modulation Under Broad-range Dietary Restriction in C. elegans. J Vis Exp 16: 126
Azim K, Angonin D, Marcy G, Pieropan F, Rivera A, Donega V, Cantù C, Williams G, Berninger B, Butt AM, Raineteau O (2017) Pharmacogenomic identification of small molecules for lineage specific manipulation of subventricular zone germinal activity. PLoS Biol 15: e2000698
Bicker F, Vasic V, Horta G, Ortega F, Nolte H, Kavyanifar A, Keller S, Stankovic ND, Harter PN, Benedito R, Lutz B, Bäuerle T, Hartwig J, Baumgart J, Krüger M, Radyushkin K, Alberi L, Berninger B, Schmidt MHH (2017) Neurovascular EGFL7 regulates adult neurogenesis in the subventricular zone and thereby affects olfactory perception. Nat Commun 8: 15922
Farrukh A, Ortega F, Fan W, Marichal N, Paez JI, Berninger B, Campo AD, Salierno MJ (2017) Bifunctional Hydrogels Containing the Laminin Motif IKVAV Promote Neurogenesis. Stem Cell Reports 9: 1432-1440
Karakatsani A, Marichal N, Urban S, Kalamakis G, Ghanem A, Schick A, Zhang Y, Conzelmann KK, Rüegg MA, Berninger B, Ruiz de Almodovar C, Gascón S, Kröger S (2017) Neuronal LRP4 regulates synapse formation in the developing CNS. Development 144: 4604-4615
Abbas F, Triplett MA, Goodhill GJ, Meyer MP (2017) A Three-Layer Network Model of Direction Selective Circuits in the Optic Tectum. Front Neural Circuits 11: 88

Furlan G, Cuccioli V, Vuillemin N, Dirian L, Muntasell AJ, Coolen M, Dray N, Bedu S, Houart C, Beaurepaire E, Foucher I, Bally-Cuif L (2017) Life-Long Neurogenic Activity of Individual Neural Stem Cells and Continuous Growth Establish an Outside-In Architecture in the Teleost Pallium. Curr Biol 27: 3288-3301.e3

Gordon-Weeks PR (2017) Phosphorylation of Drebrin and Its Role in Neuritogenesis. Adv Exp Med Biol 1006: 49-60
Dart AE, Gordon-Weeks PR (2017) The Role of Drebrin in Cancer Cell Invasion. Adv Exp Med Biol 1006: 375-389
Lipovsek M, Ledderose J, Butts T, Lafont T, Kiecker C, Wizenmann A, Graham A (2017) The emergence of mesencephalic trigeminal neurons. Neural Dev 12: 11
Favuzzi E, Marques-Smith A, Deogracias R, Winterflood CM, Sánchez-Aguilera A, Mantoan L, Maeso P, Fernandes C, Ewers H, Rico B (2017) Activity-Dependent Gating of Parvalbumin Interneuron Function by the Perineuronal Net Protein Brevican. Neuron 95: 639-655.e10

Bibollet-Bahena O, Okafuji T, Hokamp K, Tear G, Mitchell KJ (2017) A dual-strategy expression screen for candidate connectivity labels in the developing thalamus. PLoS One 12: e0177977
Mukherjee A, Williams DW (2017) More alive than dead: non-apoptotic roles for caspases in neuronal development, plasticity and disease. Cell Death Differ 24: 1411-1421
Evans MD, Tufo C, Dumitrescu AS, Grubb MS (2017) Myosin II activity is required for structural plasticity at the axon initial segment. Eur J Neurosci 46: 1751-1757
Oozeer F, Yates LL, Dean C, Formstone CJ (2017) A role for core planar polarity proteins in cell contact-mediated orientation of planar cell division across the mammalian embryonic skin. Sci Rep 7: 1880
Verbeeren J, Verma B, Niemelä EH, Yap K, Makeyev EV, Frilander MJ (2017) Alternative exon definition events control the choice between nuclear retention and cytoplasmic export of U11/U12-65K mRNA. PLoS Genet 13: e1006824
Mohammed A, O'Hare MB, Warley A, Tear G, Tuxworth RI (2017) in vivo localization of the neuronal ceroid lipofuscinosis proteins, CLN3 and CLN7, at endogenous expression levels. Neurobiol Dis 103: 123-132

Collins KM, Kainov YA, Christodolou E, Ray D, Morris Q, Hughes T, Taylor IA, Makeyev EV, Ramos A (2017) An RRM-ZnF RNA recognition module targets RBM10 to exonic sequences to promote exon exclusion. Nucleic Acids Res 45: 6761-6774

Thomas-Jinu S, Gordon PM, Fielding T, Taylor R, Smith BN, Snowden V, Blanc E, Vance C, Topp S, Wong CH, Bielen H, Williams KL, McCann EP, Nicholson GA, Pan-Vazquez A, Fox AH, Bond CS, Talbot WS, Blair IP, Shaw CE, Houart C (2017) Non-nuclear Pool of Splicing Factor SFPQ Regulates Axonal Transcripts Required for Normal Motor Development. Neuron 94: 322-336.e5

Ingham NJ, Steel KP, Drescher U (2017) On the role of ephrinA2 in auditory function. Hear Res 350: 11-16

Del Pino I, Brotons-Mas JR, Marques-Smith A, Marighetto A, Frick A, Marín O, Rico B (2017) Abnormal wiring of CCK+ basket cells disrupts spatial information coding. Nat Neurosci 20: 784-792

Kosse C, Schöne C, Bracey E, Burdakov D (2017) Orexin-driven GAD65 network of the lateral hypothalamus sets physical activity in mice. Proc Natl Acad Sci U S A 114: 4525-4530

Stockley JH, Evans K, Matthey M, Volbracht K, Agathou S, Mukanowa J, Burrone J, Káradóttir RT (2017) Surpassing light-induced cell damage in vitro with novel cell culture media. Sci Rep 7: 849

Montague K, Lowe AS, Uzquiano A, Knüfer A, Astick M, Price SR, Guthrie S (2017) The assembly of developing motor neurons depends on an interplay between spontaneous activity, type II cadherins and gap junctions. Development 144: 830-836
Walker AS, Neves G, Grillo F, Jackson RE, Rigby M, O'Donnell C, Lowe AS, Vizcay-Barrena G, Fleck RA, Burrone J (2017) Distance-dependent gradient in NMDAR-driven spine calcium signals along tapering dendrites. Proc Natl Acad Sci U S A 114: E1986-E1995
Glebov OO, Jackson RE, Winterflood CM, Owen DM, Barker EA, Doherty P, Ewers H, Burrone J (2017) Nanoscale Structural Plasticity of the Active Zone Matrix Modulates Presynaptic Function. Cell Rep 18: 2715-2728
Dart AE, Worth DC, Muir G, Chandra A, Morris JD, McKee C, Verrill C, Bryant RJ, Gordon-Weeks PR (2017) The drebrin/EB3 pathway drives invasive activity in prostate cancer. Oncogene 36: 4111-4123

McIntosh R, Norris J, Clarke JD, Alexandre P (2017) Spatial distribution and characterization of non-apical progenitors in the zebrafish embryo central nervous system. Open Biol 7(2): 160312
Diana G, Patel DS, Entchev EV, Zhan M, Lu H, Ch'ng Q (2017) Genetic control of encoding strategy in a food-sensing neural circuit. Elife 6: e24040
Trivedi N, Stabley DR, Cain B, Howell D, Laumonnerie C, Ramahi JS, Temirov J, Kerekes RA, Gordon-Weeks PR, Solecki DJ (2017) Drebrin-mediated microtubule-actomyosin coupling steers cerebellar granule neuron nucleokinesis and migration pathway selection. Nat Commun 8: 14484
Cains S, Blomeley C, Kollo M, Rácz R, Burdakov D (2017) Agrp neuron activity is required for alcohol-induced overeating. Nat Commun 8: 14014
Dehorter N, Marichal N, Marín O, Berninger B (2017) Tuning neural circuits by turning the interneuron knob. Curr Opin Neurobiol 42: 144-151
Bielen H, Pal S, Tole S, Houart C (2017) Temporal variations in early developmental decisions: an engine of forebrain evolution. Curr Opin Neurobiol 42: 152-159
Bartolini G, Sánchez-Alcañiz JA, Osório C, Valiente M, García-Frigola C, Marín O (2017) Neuregulin 3 Mediates Cortical Plate Invasion and Laminar Allocation of GABAergic Interneurons. Cell Rep 18: 1157-1170
Delbaere J, Vancamp P, Van Herck SL, Bourgeois NM, Green MJ, Wingate RJ, Darras VM (2017) MCT8 deficiency in Purkinje cells disrupts embryonic chicken cerebellar development. J Endocrinol 232: 259-272
Montague K, Guthrie S, Poparic I (2017) In Vivo and In Vitro Knockdown Approaches in the Avian Embryo as a Means to Study Semaphorin Signaling. Methods Mol Biol 1493: 403-416

2016

Kiecker C, Graham A, Logan M (2016) Differential Cellular Responses to Hedgehog Signalling in Vertebrates-What is the Role of Competence? J Dev Biol 4
Florio M, Namba T, Long K (2016) The Tortuous Routes of Migrating Neurons in the Folding Neocortex. J Neurosci 36: 3887-9
Sousa-Nunes R, Hirth F (2016) Stem cells and asymmetric cell division in Regenerative Medicine - from Protocol to Patient: 1. Biology of Tissue Regeneration: Third Edition Springer International : 87-121

García-González D, Murcia-Belmonte V, Esteban PF, Ortega F, Díaz D, Sánchez-Vera I, Lebrón-Galán R, Escobar-Castañondo L, Martínez-Millán L, Weruaga E, García-Verdugo JM, Berninger B, de Castro F (2016) Anosmin-1 over-expression increases adult neurogenesis in the subventricular zone and neuroblast migration to the olfactory bulb. Brain Struct Funct 221: 239-60
Azim K, Berninger B, Raineteau O (2016) Mosaic Subventricular Origins of Forebrain Oligodendrogenesis. Front Neurosci 10: 107
Bunk EC, Ertaylan G, Ortega F, Pavlou MA, Gonzalez Cano L, Stergiopoulos A, Safaiyan S, Völs S, van Cann M, Politis PK, Simons M, Berninger B, Del Sol A, Schwamborn JC (2016) Prox1 Is Required for Oligodendrocyte Cell Identity in Adult Neural Stem Cells of the Subventricular Zone. Stem Cells 34: 2115-29
Sahu SK, Fritz A, Tiwari N, Kovacs Z, Pouya A, Wüllner V, Bora P, Schacht T, Baumgart J, Peron S, Berninger B, Tiwari VK, Methner A (2016) TOX3 regulates neural progenitor identity. Biochim Biophys Acta 1859: 833-40
Berninger B, Jessberger S (2016) Engineering of Adult Neurogenesis and Gliogenesis. Cold Spring Harb Perspect Biol 8(5): a018861
Thakurela S, Tiwari N, Schick S, Garding A, Ivanek R, Berninger B, Tiwari VK (2016) Mapping gene regulatory circuitry of Pax6 during neurogenesis. Cell Discov 2: 15045
McAvoy KM, Scobie KN, Berger S, Russo C, Guo N, Decharatanachart P, Vega-Ramirez H, Miake-Lye S, Whalen M, Nelson M, Bergami M, Bartsch D, Hen R, Berninger B, Sahay A (2016) Modulating Neuronal Competition Dynamics in the Dentate Gyrus to Rejuvenate Aging Memory Circuits. Neuron 91: 1356-1373
Kleiderman S, Gutbier S, Ugur Tufekci K, Ortega F, Sá JV, Teixeira AP, Brito C, Glaab E, Berninger B, Alves PM, Leist M (2016) Conversion of Nonproliferating Astrocytes into Neurogenic Neural Stem Cells: Control by FGF2 and Interferon-?. Stem Cells 34: 2861-2874
Shone V, Oulion S, Casane D, Laurenti P, Graham A (2016) Mode of reduction in the number of pharyngeal segments within the sarcopterygians. Zoological Lett 2: 6
Poopalasundaram S, Chambers D, Graham A, Bouloux PM (2016) Serotonin Receptor 1A (HTR1A), a Novel Regulator of GnRH Neuronal Migration in Chick Embryo. Endocrinology 157: 4632-4640
Koudelka S, Voas MG, Almeida RG, Baraban M, Soetaert J, Meyer MP, Talbot WS, Lyons DA (2016) Individual Neuronal Subtypes Exhibit Diversity in CNS Myelination Mediated by Synaptic Vesicle Release. Curr Biol 26: 1447-55
Stiber JA, Wu JH, Zhang L, Nepliouev I, Zhang ZS, Bryson VG, Brian L, Bentley RC, Gordon-Weeks PR, Rosenberg PB, Freedman NJ (2016) The Actin-Binding Protein Drebrin Inhibits Neointimal Hyperplasia. Arterioscler Thromb Vasc Biol 36: 984-93
Kiecker C (2016) The chick embryo as a model for the effects of prenatal exposure to alcohol on craniofacial development. Dev Biol 415: 314-325
Millan MJ, Andrieux A, Bartzokis G, Cadenhead K, Dazzan P, Fusar-Poli P, Gallinat J, Giedd J, Grayson DR, Heinrichs M, Kahn R, Krebs MO, Leboyer M, Lewis D, Marin O, Marin P, Meyer-Lindenberg A, McGorry P, McGuire P, Owen MJ, Patterson P, Sawa A, Spedding M, Uhlhaas P, Vaccarino F, Wahlestedt C, Weinberger D (2016) Altering the course of schizophrenia: progress and perspectives. Nat Rev Drug Discov 15: 485-515
Glebov OO, Cox S, Humphreys L, Burrone J (2016) Neuronal activity controls transsynaptic geometry. Sci Rep 6: 22703
Marques-Smith A, Favuzzi E, Rico B (2016) Shaping Early Networks to Rule Mature Circuits: Little MiRs Go a Long Way. Neuron 92: 1154-1157
Wefelmeyer W, Puhl CJ, Burrone J (2016) Homeostatic Plasticity of Subcellular Neuronal Structures: From Inputs to Outputs. Trends Neurosci 39: 656-667
Jackson RE, Burrone J (2016) Visualizing Presynaptic Calcium Dynamics and Vesicle Fusion with a Single Genetically Encoded Reporter at Individual Synapses. Front Synaptic Neurosci 8: 21
Gordon-Weeks PR (2016) The role of the drebrin/EB3/Cdk5 pathway in dendritic spine plasticity, implications for Alzheimer's disease. Brain Res Bull 126: 293-299
Herrera CG, Ponomarenko A, Korotkova T, Burdakov D, Adamantidis A (2016) Sleep & metabolism: The multitasking ability of lateral hypothalamic inhibitory circuitries. Front Neuroendocrinol
Dumitrescu AS, Evans MD, Grubb MS (2016) Evaluating Tools for Live Imaging of Structural Plasticity at the Axon Initial Segment. Front Cell Neurosci 10: 268
Marín O (2016) Developmental timing and critical windows for the treatment of psychiatric disorders. Nat Med 22: 1229-1238
Grubb MS, Hoogenraad CC, Schwabe L, López-Bendito G (2016) Moving on: mobility for early-career neuroscientists. Eur J Neurosci 44: 2285-90
González JA, Jensen LT, Iordanidou P, Strom M, Fugger L, Burdakov D (2016) Inhibitory Interplay between Orexin Neurons and Eating. Curr Biol 26: 2486-91
Kiecker C, Bates T, Bell E (2016) Molecular specification of germ layers in vertebrate embryos. Cell Mol Life Sci 73: 923-47
Antinucci P, Suleyman O, Monfries C, Hindges R (2016) Neural Mechanisms Generating Orientation Selectivity in the Retina. Curr Biol 26: 1802-15

Yap K, Xiao Y, Friedman BA, Je HS, Makeyev EV (2016) Polarizing the Neuron through Sustained Co-expression of Alternatively Spliced Isoforms. Cell Rep 15: 1316-28
Panousopoulou E, Hobbs C, Mason I, Green JB, Formstone CJ (2016) Epiboly generates the epidermal basal monolayer and spreads the nascent mammalian skin to enclose the embryonic body. J Cell Sci 129: 1915-27

Qian X, Hamid FM, El Sahili A, Darwis DA, Wong YH, Bhushan S, Makeyev EV, Lescar J (2016) Functional Evolution in Orthologous Cell-encoded RNA-dependent RNA Polymerases. J Biol Chem 291: 9295-309
Spires-Jones TL, Poirazi P, Grubb MS (2016) Opening up: open access publishing, data sharing, and how they can influence your neuroscience career. Eur J Neurosci 43: 1413-9
Araya C, Carmona-Fontaine C, Clarke JD (2016) Extracellular matrix couples the convergence movements of mesoderm and neural plate during the early stages of neurulation. Dev Dyn 245: 580-9
Leto K, Arancillo M, Becker EB, Buffo A, Chiang C, Ding B, Dobyns WB, Dusart I, Haldipur P, Hatten ME, Hoshino M, Joyner AL, Kano M, Kilpatrick DL, Koibuchi N, Marino S, Martinez S, Millen KJ, Millner TO, Miyata T, Parmigiani E, Schilling K, Sekerková G, Sillitoe RV, Sotelo C, Uesaka N, Wefers A, Wingate RJ, Hawkes R (2016) Consensus Paper: Cerebellar Development. Cerebellum 15: 789-828
Delbaere J, Van Herck SL, Bourgeois NM, Vancamp P, Yang S, Wingate RJ, Darras VM (2016) Mosaic Expression of Thyroid Hormone Regulatory Genes Defines Cell Type-Specific Dependency in the Developing Chicken Cerebellum. Cerebellum 15: 710-725

Leiwe MN, Hendry AC, Bard AD, Eglen SJ, Lowe AS, Thompson ID (2016) Geniculo-Cortical Projection Diversity Revealed within the Mouse Visual Thalamus. PLoS One 11: e0144846
Cate MS, Gajendra S, Alsbury S, Raabe T, Tear G, Mitchell KJ (2016) Mushroom body defect is required in parallel to Netrin for midline axon guidance in Drosophila. Development 143: 972-7
Kawaguchi D, Sahara S, Zembrzycki A, O'Leary DDM (2016) Generation and analysis of an improved Foxg1-IRES-Cre driver mouse line. Dev Biol 412: 139-147

Shepherd D, Harris R, Williams DW, Truman JW (2016) Postembryonic lineages of the Drosophila ventral nervous system: Neuroglian expression reveals the adult hemilineage associated fiber tracts in the adult thoracic neuromeres. J Comp Neurol 524: 2677-95
Buckley CE, Moore RE, Reade A, Goldberg AR, Weiner OD, Clarke JD (2016) Reversible Optogenetic Control of Subcellular Protein Localization in a Live Vertebrate Embryo. Dev Cell 36: 117-26

2015

Kostadinov D, Sanes JR (2015) Protocadherin-dependent dendritic self-avoidance regulates neural connectivity and circuit function. Elife 4
Kiecker C (2015) WNT Takes Centre Stage in Border Control. EBioMedicine 2: 480-1
Bergami M, Masserdotti G, Temprana SG, Motori E, Eriksson TM, Göbel J, Yang SM, Conzelmann KK, Schinder AF, Götz M, Berninger B (2015) A critical period for experience-dependent remodeling of adult-born neuron connectivity. Neuron 85: 710-7
Raposo AA, Vasconcelos FF, Drechsel D, Marie C, Johnston C, Dolle D, Bithell A, Gillotin S, van den Berg DL, Ettwiller L, Flicek P, Crawford GE, Parras CM, Berninger B, Buckley NJ, Guillemot F, Castro DS (2015) Ascl1 Coordinately Regulates Gene Expression and the Chromatin Landscape during Neurogenesis. Cell Rep 15: S2211-1247
Masserdotti G, Gillotin S, Sutor B, Drechsel D, Irmler M, Jørgensen HF, Sass S, Theis FJ, Beckers J, Berninger B, Guillemot F, Götz M (2015) Transcriptional Mechanisms of Proneural Factors and REST in Regulating Neuronal Reprogramming of Astrocytes. Cell Stem Cell 17: 74-88
Sahu SK, Garding A, Tiwari N, Thakurela S, Toedling J, Gebhard S, Ortega F, Schmarowski N, Berninger B, Nitsch R, Schmidt M, Tiwari VK (2015) JNK-dependent gene regulatory circuitry governs mesenchymal fate. EMBO J 34: 2162-81
Aravantinou-Fatorou K, Ortega F, Chroni-Tzartou D, Antoniou N, Poulopoulou C, Politis PK, Berninger B, Matsas R, Thomaidou D (2015) CEND1 and NEUROGENIN2 Reprogram Mouse Astrocytes and Embryonic Fibroblasts to Induced Neural Precursors and Differentiated Neurons. Stem Cell Reports 5: 405-18
Heinrich C, Spagnoli FM, Berninger B (2015) In vivo reprogramming for tissue repair. Nat Cell Biol 17: 204-11
Péron S, Berninger B (2015) Imported Stem Cells Strike against Stroke. Cell Stem Cell 17: 501-2
Chen G, Wernig M, Berninger B, Nakafuku M, Parmar M, Zhang CL (2015) In Vivo Reprogramming for Brain and Spinal Cord Repair. eNeuro 2(5): 0106-15.20