Publications

2019

Diana G, Sainsbury TTJ, Meyer MP (2019) Bayesian inference of neuronal assemblies. PLoS Comput Biol 15: e1007481
Araya C, Häkkinen HM, Carcamo L, Cerda M, Savy T, Rookyard C, Peyriéras N, Clarke JDW (2019) Cdh2 coordinates Myosin-II dependent internalisation of the zebrafish neural plate. Sci Rep 9: 1835

Campo-Paysaa F, Clarke JD, Wingate RJ (2019) Generation of the squamous epithelial roof of the 4th ventricle Elife 8

Subathra Poopalasundaram, Jo Richardson, Annabelle Scott, Alex Donovan, Karen Liu and Anthony Graham (2019) Diminution of pharyngeal segmentation and the evolution of the amniotes Zoological Letters 5:6

Bragado Alonso S, Reinert JK, Marichal N, Massalini S, Berninger B, Kuner T, Calegari F (2019) An increase in neural stem cells and olfactory bulb adult neurogenesis improves discrimination of highly similar odorants. EMBO J
Favuzzi E, Deogracias R, Marques-Smith A, Maeso P, Jezequel J, Exposito-Alonso D, Balia M, Kroon T, Hinojosa AJ, F Maraver E, Rico B (2019) Distinct molecular programs regulate synapse specificity in cortical inhibitory circuits. Science 363: 413-417

Martínez-Martínez MÁ, Ciceri G, Espinós A, Fernández V, Marín O, Borrell V (2019) Extensive branching of radially-migrating neurons in the mammalian cerebral cortex. J Comp Neurol 527: 1558-1576
Scott R, Sánchez-Aguilera A, van Elst K, Lim L, Dehorter N, Bae SE, Bartolini G, Peles E, Kas MJH, Bruining H, Marín O (2019) Loss of Cntnap2 Causes Axonal Excitability Deficits, Developmental Delay in Cortical Myelination, and Abnormal Stereotyped Motor Behavior. Cereb Cortex 29: 586-597

2018

Wong FK, Bercsenyi K, Sreenivasan V, Portalés A, Fernández-Otero M, Marín O (2018) Pyramidal cell regulation of interneuron survival sculpts cortical networks. Nature 557: 668-673
Long KR, Newland B, Florio M, Kalebic N, Langen B, Kolterer A, Wimberger P, Huttner WB (2018) Extracellular Matrix Components HAPLN1, Lumican, and Collagen I Cause Hyaluronic Acid-Dependent Folding of the Developing Human Neocortex. Neuron 99: 702-719.e6

Lipovsek M, Wingate RJ (2018) Conserved and divergent development of brainstem vestibular and auditory nuclei. Elife 7

Taylor RD, Heine M, Emptage NJ, Andreae LC (2018) Neuronal Receptors Display Cytoskeleton-Independent Directed Motion on the Plasma Membrane. iScience 10: 234-244
Chai A, Mateus AM, Oozeer F, Sousa-Nunes R (2018) Spatiotemporally controlled genetic perturbation for efficient large-scale studies of cell non-autonomous effects. Elife 7
Tiwari N, Pataskar A, Péron S, Thakurela S, Sahu SK, Figueres-Oñate M, Marichal N, López-Mascaraque L, Tiwari VK, Berninger B (2018) Stage-Specific Transcription Factors Drive Astrogliogenesis by Remodeling Gene Regulatory Landscapes. Cell Stem Cell 23: 557-571.e8
Karimova M, Baker O, Camgoz A, Naumann R, Buchholz F, Anastassiadis K (2018) A single reporter mouse line for Vika, Flp, Dre, and Cre-recombination. Sci Rep 8: 14453
Zimmermann T, Maroso M, Beer A, Baddenhausen S, Ludewig S, Fan W, Vennin C, Loch S, Berninger B, Hofmann C, Korte M, Soltesz I, Lutz B, Leschik J (2018) Neural stem cell lineage-specific cannabinoid type-1 receptor regulates neurogenesis and plasticity in the adult mouse hippocampus. Cereb Cortex 28: 4454-4471
Yap K, Mukhina S, Zhang G, Tan JSC, Ong HS, Makeyev EV (2018) A Short Tandem Repeat-Enriched RNA Assembles a Nuclear Compartment to Control Alternative Splicing and Promote Cell Survival. Mol Cell
Lim L, Mi D, Llorca A, Marín O (2018) Development and Functional Diversification of Cortical Interneurons. Neuron 100: 294-313
Reh TA, Hindges R (2018) MicroRNAs in Retinal Development. Annu Rev Vis Sci 4: 25-44
Prekop HT, Kroiss A, Rook V, Zagoraiou L, Jessell T, Fernandes C, Delogu A, Wingate R (2018) SOX14 is required for a specific subset of cerebello-olivary projections. J Neurosci 21: 1456-18
Andreae LC, Basson MA (2018) Sex bias in autism: new insights from Chd8 mutant mice? Nat Neurosci 21: 1144-1146
Javer A, Currie M, Lee CW, Hokanson J, Li K, Martineau CN, Yemini E, Grundy LJ, Li C, Ch'ng Q, Schafer WR, Nollen EAA, Kerr R, Brown AEX (2018) An open-source platform for analyzing and sharing worm-behavior data. Nat Methods 15: 645-646
Taylor SE, Taylor RD, Price J, Andreae LC (2018) Single-molecule fluorescence in-situ hybridization reveals that human SHANK3 mRNA expression varies during development and in autism-associated SHANK3 heterozygosity. Stem Cell Res Ther 9: 206
Hinojosa AJ, Deogracias R, Rico B (2018) The Microtubule Regulator NEK7 Coordinates the Wiring of Cortical Parvalbumin Interneurons. Cell Rep 24: 1231-1242
Laurent P, Ch'ng Q, Jospin M, Chen C, Lorenzo R, de Bono M (2018) Genetic dissection of neuropeptide cell biology at high and low activity in a defined sensory neuron. Proc Natl Acad Sci USA 115: E6890-E6899
Grillo FW, Neves G, Walker A, Vizcay-Barrena G, Fleck RA, Branco T, Burrone J (2018) A Distance-Dependent Distribution of Presynaptic Boutons Tunes Frequency-Dependent Dendritic Integration. Neuron 99: 275-282.e3

Denaxa M, Neves G, Burrone J, Pachnis V (2018) Homeostatic Regulation of Interneuron Apoptosis During Cortical Development. J Exp Neurosci 12: 1179069518784277
Holzbaur E, Burrone J (2018) Editorial overview: Cellular neuroscience. Curr Opin Neurobiol 51: iv-vi
Andreae LC (2018) FENS-Kavli winter symposium: Review and perspectives on neurological diseases. Eur J Neurosci 48: 1867-1869
Khan AG, Hofer SB (2018) Contextual signals in visual cortex. Curr Opin Neurobiol 52: 131-138

Favuzzi E, Rico B (2018) Molecular diversity underlying cortical excitatory and inhibitory synapse development. Curr Opin Neurobiol 53: 8-15
Lim L, Pakan JMP, Selten MM, Marques-Smith A, Llorca A, Bae SE, Rochefort NL, Marín O (2018) Optimization of interneuron function by direct coupling of cell migration and axonal targeting. Nat Neurosci 21: 920-931

Zhao S, Fan W, Guo X, Xue L, Berninger B, Salierno MJ, Del Campo A (2018) Microenvironments to study migration and somal translocation in cortical neurons. Biomaterials 156: 238-247
Khan AG, Poort J, Chadwick A, Blot A, Sahani M, Mrsic-Flogel TD, Hofer SB (2018) Distinct learning-induced changes in stimulus selectivity and interactions of GABAergic interneuron classes in visual cortex. Nat Neurosci 21: 851-859

Galliano E, Franzoni E, Breton M, Chand AN, Byrne DJ, Murthy VN, Grubb MS (2018) Embryonic and postnatal neurogenesis produce functionally distinct subclasses of dopaminergic neuron. Elife 7: e32373
Constance WD, Mukherjee A, Fisher YE, Pop S, Blanc E, Toyama Y, Williams DW (2018) Neurexin and Neuroligin-based adhesion complexes drive axonal arborisation growth independent of synaptic activity. Elife 7: e31659
Mi D, Li Z, Lim L, Li M, Moissidis M, Yang Y, Gao T, Hu TX, Pratt T, Price DJ, Sestan N, Marín O (2018) Early emergence of cortical interneuron diversity in the mouse embryo. Science 360: 81-85
Giger FA, Houart C (2018) The Birth of the Eye Vesicle: When Fate Decision Equals Morphogenesis. Front Neurosci 12: 87
Denaxa M, Neves G, Rabinowitz A, Kemlo S, Liodis P, Burrone J, Pachnis V (2018) Modulation of Apoptosis Controls Inhibitory Interneuron Number in the Cortex. Cell Rep 22: 1710-1721

Antinucci P, Hindges R (2018) Orientation-Selective Retinal Circuits in Vertebrates. Front Neural Circuits 12: 11
Del Pino I, Rico B, Marín O (2018) Neural circuit dysfunction in mouse models of neurodevelopmental disorders. Curr Opin Neurobiol 48: 174-182
Kiecker C (2018) The origins of the circumventricular organs. J Anat 232: 540-553
Andreae LC, Burrone J (2018) The role of spontaneous neurotransmission in synapse and circuit development. J Neurosci Res 96: 354-359

Kathuria A, Nowosiad P, Jagasia R, Aigner S, Taylor RD, Andreae LC, Gatford NJF, Lucchesi W, Srivastava DP, Price J (2018) Stem cell-derived neurons from autistic individuals with SHANK3 mutation show morphogenetic abnormalities during early development. Mol Psychiatry 23: 735-746

2017

Clarke J, Gillingwater T, Graham A, Milz S (2017) Editorial - Journal of Anatomy January 2017. J Anat 230: 1-3

Wright R, Newey SE, Ilie A, Wefelmeyer W, Raimondo JV, Ginham R, Mcllhinney RAJ, Akerman CJ (2017) Neuronal Chloride Regulation via KCC2 Is Modulated through a GABAB Receptor Protein Complex. J Neurosci 37: 5447-5462
Heide M, Long KR, Huttner WB (2017) Novel gene function and regulation in neocortex expansion. Curr Opin Cell Biol 49: 22-30
Hamid FM, Makeyev EV (2017) A mechanism underlying position-specific regulation of alternative splicing. Nucleic Acids Res 45: 12455-12468
Patel DS, Diana G, Entchev EV, Zhan M, Lu H, Ch'ng Q (2017) Quantification of Information Encoded by Gene Expression Levels During Lifespan Modulation Under Broad-range Dietary Restriction in C. elegans. J Vis Exp 16: 126
Azim K, Angonin D, Marcy G, Pieropan F, Rivera A, Donega V, Cantù C, Williams G, Berninger B, Butt AM, Raineteau O (2017) Pharmacogenomic identification of small molecules for lineage specific manipulation of subventricular zone germinal activity. PLoS Biol 15: e2000698
Bicker F, Vasic V, Horta G, Ortega F, Nolte H, Kavyanifar A, Keller S, Stankovic ND, Harter PN, Benedito R, Lutz B, Bäuerle T, Hartwig J, Baumgart J, Krüger M, Radyushkin K, Alberi L, Berninger B, Schmidt MHH (2017) Neurovascular EGFL7 regulates adult neurogenesis in the subventricular zone and thereby affects olfactory perception. Nat Commun 8: 15922
Farrukh A, Ortega F, Fan W, Marichal N, Paez JI, Berninger B, Campo AD, Salierno MJ (2017) Bifunctional Hydrogels Containing the Laminin Motif IKVAV Promote Neurogenesis. Stem Cell Reports 9: 1432-1440
Abbas F, Triplett MA, Goodhill GJ, Meyer MP (2017) A Three-Layer Network Model of Direction Selective Circuits in the Optic Tectum. Front Neural Circuits 11: 88

Furlan G, Cuccioli V, Vuillemin N, Dirian L, Muntasell AJ, Coolen M, Dray N, Bedu S, Houart C, Beaurepaire E, Foucher I, Bally-Cuif L (2017) Life-Long Neurogenic Activity of Individual Neural Stem Cells and Continuous Growth Establish an Outside-In Architecture in the Teleost Pallium. Curr Biol 27: 3288-3301.e3

Gordon-Weeks PR (2017) Phosphorylation of Drebrin and Its Role in Neuritogenesis. Adv Exp Med Biol 1006: 49-60
Dart AE, Gordon-Weeks PR (2017) The Role of Drebrin in Cancer Cell Invasion. Adv Exp Med Biol 1006: 375-389
Lipovsek M, Ledderose J, Butts T, Lafont T, Kiecker C, Wizenmann A, Graham A (2017) The emergence of mesencephalic trigeminal neurons. Neural Dev 12: 11
Favuzzi E, Marques-Smith A, Deogracias R, Winterflood CM, Sánchez-Aguilera A, Mantoan L, Maeso P, Fernandes C, Ewers H, Rico B (2017) Activity-Dependent Gating of Parvalbumin Interneuron Function by the Perineuronal Net Protein Brevican. Neuron 95: 639-655.e10

Bibollet-Bahena O, Okafuji T, Hokamp K, Tear G, Mitchell KJ (2017) A dual-strategy expression screen for candidate connectivity labels in the developing thalamus. PLoS One 12: e0177977
Mukherjee A, Williams DW (2017) More alive than dead: non-apoptotic roles for caspases in neuronal development, plasticity and disease. Cell Death Differ 24: 1411-1421
Evans MD, Tufo C, Dumitrescu AS, Grubb MS (2017) Myosin II activity is required for structural plasticity at the axon initial segment. Eur J Neurosci 46: 1751-1757
Oozeer F, Yates LL, Dean C, Formstone CJ (2017) A role for core planar polarity proteins in cell contact-mediated orientation of planar cell division across the mammalian embryonic skin. Sci Rep 7: 1880
Verbeeren J, Verma B, Niemelä EH, Yap K, Makeyev EV, Frilander MJ (2017) Alternative exon definition events control the choice between nuclear retention and cytoplasmic export of U11/U12-65K mRNA. PLoS Genet 13: e1006824
Mohammed A, O'Hare MB, Warley A, Tear G, Tuxworth RI (2017) in vivo localization of the neuronal ceroid lipofuscinosis proteins, CLN3 and CLN7, at endogenous expression levels. Neurobiol Dis 103: 123-132

Collins KM, Kainov YA, Christodolou E, Ray D, Morris Q, Hughes T, Taylor IA, Makeyev EV, Ramos A (2017) An RRM-ZnF RNA recognition module targets RBM10 to exonic sequences to promote exon exclusion. Nucleic Acids Res 45: 6761-6774

Ingham NJ, Steel KP, Drescher U (2017) On the role of ephrinA2 in auditory function. Hear Res 350: 11-16

Del Pino I, Brotons-Mas JR, Marques-Smith A, Marighetto A, Frick A, Marín O, Rico B (2017) Abnormal wiring of CCK+ basket cells disrupts spatial information coding. Nat Neurosci 20: 784-792

Kosse C, Schöne C, Bracey E, Burdakov D (2017) Orexin-driven GAD65 network of the lateral hypothalamus sets physical activity in mice. Proc Natl Acad Sci U S A 114: 4525-4530

Stockley JH, Evans K, Matthey M, Volbracht K, Agathou S, Mukanowa J, Burrone J, Káradóttir RT (2017) Surpassing light-induced cell damage in vitro with novel cell culture media. Sci Rep 7: 849

Montague K, Lowe AS, Uzquiano A, Knüfer A, Astick M, Price SR, Guthrie S (2017) The assembly of developing motor neurons depends on an interplay between spontaneous activity, type II cadherins and gap junctions. Development 144: 830-836
Walker AS, Neves G, Grillo F, Jackson RE, Rigby M, O'Donnell C, Lowe AS, Vizcay-Barrena G, Fleck RA, Burrone J (2017) Distance-dependent gradient in NMDAR-driven spine calcium signals along tapering dendrites. Proc Natl Acad Sci U S A 114: E1986-E1995
Glebov OO, Jackson RE, Winterflood CM, Owen DM, Barker EA, Doherty P, Ewers H, Burrone J (2017) Nanoscale Structural Plasticity of the Active Zone Matrix Modulates Presynaptic Function. Cell Rep 18: 2715-2728
Dart AE, Worth DC, Muir G, Chandra A, Morris JD, McKee C, Verrill C, Bryant RJ, Gordon-Weeks PR (2017) The drebrin/EB3 pathway drives invasive activity in prostate cancer. Oncogene 36: 4111-4123

McIntosh R, Norris J, Clarke JD, Alexandre P (2017) Spatial distribution and characterization of non-apical progenitors in the zebrafish embryo central nervous system. Open Biol 7(2): 160312
Diana G, Patel DS, Entchev EV, Zhan M, Lu H, Ch'ng Q (2017) Genetic control of encoding strategy in a food-sensing neural circuit. Elife 6: e24040