Publications

2006

Selman C, Kerrison ND, Cooray A, Piper MD, Lingard SJ, Barton RH, Schuster EF, Blanc E, Gems D, Nicholson JK, Thornton JM, Partridge L, Withers DJ (2006) Coordinated multitissue transcriptional and plasma metabonomic profiles following acute caloric restriction in mice. Physiol Genomics 27: 187-200

McElwee JJ, Schuster E, Blanc E, Thornton J, Gems D (2006) Erratum to "Diapause-associated metabolic traits reiterated in long-lived daf-2 mutants in the nematode Caenorhabditis elegans" [Mech. Ageing Dev. 127 (5) (2006) 458-472]. Mech Ageing Dev 127: 922-36

Ahmad-Annuar A, Ciani L, Simeonidis I, Herreros J, Fredj NB, Rosso SB, Hall A, Brickley S, Salinas PC (2006) Signaling across the synapse: a role for Wnt and Dishevelled in presynaptic assembly and neurotransmitter release. J Cell Biol 174: 127-39

Zhu Y, Guthrie S, Murakami F (2006) Ephrin A/EphA controls the rostral turning polarity of a lateral commissural tract in chick hindbrain. Development 133: 3837-46

Knight RD, Schilling TF (2006) Cranial neural crest and development of the head skeleton. Adv Exp Med Biol 589: 120-33

Kuerner KM, Steinbeisser H (2006) Expression analysis of IGFBP-rP10, IGFBP-like and Mig30 in early Xenopus development. Dev Dyn 235: 2861-7

Lou X, Fang P, Li S, Hu RY, Kuerner KM, Steinbeisser H, Ding X (2006) Xenopus Tbx6 mediates posterior patterning via activation of Wnt and FGF signalling. Cell Res 16: 771-9

Lledo PM, Alonso M, Grubb MS (2006) Adult neurogenesis and functional plasticity in neuronal circuits. Nat Rev Neurosci 7: 179-93

Yip PK, Wong LF, Pattinson D, Battaglia A, Grist J, Bradbury EJ, Maden M, McMahon SB, Mazarakis ND (2006) Lentiviral vector expressing retinoic acid receptor beta2 promotes recovery of function after corticospinal tract injury in the adult rat spinal cord. Hum Mol Genet 15: 3107-18

So PL, Yip PK, Bunting S, Wong LF, Mazarakis ND, Hall S, McMahon S, Maden M, Corcoran JP (2006) Interactions between retinoic acid, nerve growth factor and sonic hedgehog signalling pathways in neurite outgrowth. Dev Biol 298: 167-75

Olkkonen VM, Johansson M, Suchanek M, Yan D, Hynynen R, Ehnholm C, Jauhiainen M, Thiele C, Lehto M (2006) The OSBP-related proteins (ORPs): global sterol sensors for co-ordination of cellular lipid metabolism, membrane trafficking and signalling processes? Biochem Soc Trans 34: 389-91

Staudt N, Fellert S, Chung HR, Jäckle H, Vorbrüggen G (2006) Mutations of the Drosophila zinc finger-encoding gene vielfältig impair mitotic cell divisions and cause improper chromosome segregation. Mol Biol Cell 17: 2356-65

Delogu A, Schebesta A, Sun Q, Aschenbrenner K, Perlot T, Busslinger M (2006) Gene repression by Pax5 in B cells is essential for blood cell homeostasis and is reversed in plasma cells. Immunity 24: 269-81

Heit JJ, Apelqvist AA, Gu X, Winslow MM, Neilson JR, Crabtree GR, Kim SK (2006) Calcineurin/NFAT signalling regulates pancreatic beta-cell growth and function. Nature 443: 345-9

Smart NG, Apelqvist AA, Gu X, Harmon EB, Topper JN, MacDonald RJ, Kim SK (2006) Conditional expression of Smad7 in pancreatic beta cells disrupts TGF-beta signaling and induces reversible diabetes mellitus. PLoS Biol 4: e39

D'Antonio M, Michalovich D, Paterson M, Droggiti A, Woodhoo A, Mirsky R, Jessen KR (2006) Gene profiling and bioinformatic analysis of Schwann cell embryonic development and myelination. Glia 53: 501-15

Cadman SM, Kim SH, Hu Y, González-Martínez D, Bouloux PM (2006) Molecular Pathogenesis of Kallmann's Syndrome. Horm Res 67: 231-242

Hammond CL, Hinits Y, Osborn DP, Minchin JE, Tettamanti G, Hughes SM (2006) Signals and myogenic regulatory factors restrict pax3 and pax7 expression to dermomyotome-like tissue in zebrafish. Dev Biol 302(2): 504-521

Slack C, Somers WG, Sousa-Nunes R, Chia W, Overton PM (2006) A mosaic genetic screen for novel mutations affecting Drosophila neuroblast divisions. BMC Genet 7: 33

Prakash N, Brodski C, Naserke T, Puelles E, Gogoi R, Hall A, Panhuysen M, Echevarria D, Sussel L, Weisenhorn DM, Martinez S, Arenas E, Simeone A, Wurst W (2006) A Wnt1-regulated genetic network controls the identity and fate of midbrain-dopaminergic progenitors in vivo. Development 133: 89-98

Puelles E, Acampora D, Gogoi R, Tuorto F, Papalia A, Guillemot F, Ang SL, Simeone A (2006) Otx2 controls identity and fate of glutamatergic progenitors of the thalamus by repressing GABAergic differentiation. J Neurosci 26: 5955-64

Basson MA, Watson-Johnson J, Shakya R, Akbulut S, Hyink D, Costantini FD, Wilson PD, Mason IJ, Licht JD (2006) Branching morphogenesis of the ureteric epithelium during kidney development is coordinated by the opposing functions of GDNF and Sprouty1. Dev Biol

Cornbrooks C, Bland C, Williams DW, Truman JW, Rand MD (2006) Delta expression in post-mitotic neurons identifies distinct subsets of adult-specific lineages in Drosophila. J Neurobiol

Williams DW, Kondo S, Krzyzanowska A, Hiromi Y, Truman JW (2006) Local caspase activity directs engulfment of dendrites during pruning. Nat Neurosci 9: 1234-6

Meyer MP, Smith SJ (2006) Evidence from in vivo imaging that synaptogenesis guides the growth and branching of axonal arbors by two distinct mechanisms. J Neurosci 26: 3604-14

Erickson T, Scholpp S, Brand M, Moens CB, Jan Waskiewicz A (2006) Pbx proteins cooperate with Engrailed to pattern the midbrain-hindbrain and diencephalic-mesencephalic boundaries. Dev Biol

Mann CJ, Hinits Y, Hughes SM (2006) Comparison of neurolin (ALCAM) and neurolin-like cell adhesion molecule (NLCAM) expression in zebrafish. Gene Expr Patterns

Fraser GJ, Berkovitz BK, Graham A, Smith MM (2006) Gene deployment for tooth replacement in the rainbow trout (Oncorhynchus mykiss): a developmental model for evolution of the osteichthyan dentition. Evol Dev 8: 446-57

Wingate R, Kwint M (2006) Imagining the brain cell: the neuron in visual culture. Nat Rev Neurosci 7: 745-52

Reber M, Hindges R, Lemke G (2006) In: Axon Growth and Guidance, Landes Bioscience. Ed. Bagnard D
Eph receptors and ephrin ligands in axon guidance. Book chapter In Press

Wilson LJ, Wingate RJ (2006) Temporal identity transition in the avian cerebellar rhombic lip. Dev Biol 297: 508-21

Buescher M, Tio M, Tear G, Overton PM, Brook WJ, Chia W (2006) Functions of the segment polarity genes midline and H15 in Drosophila melanogaster neurogenesis. Dev Biol 292: 418-29

Wakefield S, Tear G (2006) The Drosophila reticulon, Rtnl-1, has multiple differentially expressed isoforms that are associated with a sub-compartment of the endoplasmic reticulum. Cell Mol Life Sci

Gögel S, Wakefield S, Tear G, Klämbt C and Gordon-Weeks P R (2006) The Drosophila microtubule associated protein Futsch is phosphorylated by Shaggy/Zeste-white 3 at a homologous GSK3b phosphorylation site in MAP1B. Mol Cell Neurosci : In press

Peris L, Andrieux A, Thery M, Fauré J, Saoudi Y, Lafanechere L, Chilton J K, Gordon-Weeks P R, Galjart N, Bornens M, Wordeman L, Wehland J, Andrieux A and Job D (2006) Tubulin tyrosination is a major factor affecting recruitment of CAP-Gly proteins at microtubule +ends J. Cell Biol. : In Press

Scholpp S, Wolf O, Brand M, Lumsden A (2006) Hedgehog signalling from the zona limitans intrathalamica orchestrates patterning of the zebrafish diencephalon. Development 133: 855-64

Wong LF, Yip PK, Battaglia A, Grist J, Corcoran J, Maden M, Azzouz M, Kingsman SM, Kingsman AJ, Mazarakis ND, McMahon SB (2006) Retinoic acid receptor beta2 promotes functional regeneration of sensory axons in the spinal cord. Nat Neurosci 9: 243-50

Maden M (2006) Retinoids have differing efficacies on alveolar regeneration in a dexamethasone-treated mouse. Am J Respir Cell Mol Biol 35: 260-7

Maden M (2006) Retinoids and spinal cord development. J Neurobiol 66: 726-38

Tendeng C, Houart C (2006) Cloning and embryonic expression of five distinct sfrp genes in the zebrafish Danio rerio. Gene Expr Patterns

Foucher I, Mione M, Simeone A, Acampora D, Bally-Cuif L, Houart C (2006) Differentiation of cerebellar cell identities in absence of Fgf signalling in zebrafish Otx morphants. Development 133: 1891-900

Stigloher C, Ninkovic J, Laplante M, Geling A, Tannhäuser B, Topp S, Kikuta H, Becker TS, Houart C, Bally-Cuif L (2006) Segregation of telencephalic and eye-field identities inside the zebrafish forebrain territory is controlled by Rx3. Development 133: 2925-2935

Ahmed AI, Eickholt BJ (2006) In: Semaphorins: Receptor and Intracellular Signaling Mechanisms, Landes Bioscience. ed Pasterkamp J.
Intracellular Kinases in Semaphorin Signalling. Book chapter

Cole AR, Causeret F, Yadirgi G, Hastie CJ, McLauchlan H, McManus EJ, Hernández F, Eickholt BJ, Nikolic M, Sutherland C (2006) Distinct priming kinases contribute to differential regulation of collapsin response mediator proteins by glycogen synthase kinase-3 in vivo. J Biol Chem 281: 16591-8

Chadborn NH, Ahmed AI, Holt MR, Prinjha R, Dunn GA, Jones GE, Eickholt BJ (2006) PTEN couples Sema3A signalling to growth cone collapse. J Cell Sci 119: 951-7

Mitsiadis TA, Smith MM (2006) How do genes make teeth to order through development? J Exp Zoolog B Mol Dev Evol 306: 177-82

Ahlberg PE, Smith MM, Johanson Z (2006) Developmental plasticity and disparity in early dipnoan (lungfish) dentitions. Evol Dev 8: 331-49

Fraser GJ, Graham A, Smith MM (2006) Developmental and evolutionary origins of the vertebrate dentition: molecular controls for spatio-temporal organisation of tooth sites in osteichthyans. J Exp Zoolog B Mol Dev Evol 306: 183-203

Devoto SH, Stoiber W, Hammond CL, Steinbacher P, Haslett JR, Barresi MJ, Patterson SE, Adiarte EG, Hughes SM (2006) Generality of vertebrate developmental patterns: evidence for a dermomyotome in fish. Evol Dev 8: 101-10

Hartman KN, Pal SK, Burrone J, Murthy VN (2006) Activity-dependent regulation of inhibitory synaptic transmission in hippocampal neurons. Nat Neurosci 9: 642-9

Carvalho RF, Beutler M, Marler KJ, Knöll B, Becker-Barroso E, Heintzmann R, Ng T, Drescher U (2006) Silencing of EphA3 through a cis interaction with ephrinA5. Nat Neurosci 9: 322-30

Chambers D, Mason I (2006) A high throughput messenger RNA differential display screen identifies discrete domains of gene expression and novel patterning processes along the developing neural tube. BMC Dev Biol 6: 9

2005

Chee FC, Mudher A, Cuttle MF, Newman TA, MacKay D, Lovestone S, Shepherd D (2005) Over-expression of tau results in defective synaptic transmission in Drosophila neuromuscular junctions. Neurobiol Dis 20: 918-28

Siyad F, Griffiths J, Janjua F, Jackson E, Rodrigues I, Kerr F, Mackay D, Lovestone S (2005) School students as Drosophila experimenters. PLoS Biol 3: e246

Gordon-Weeks PR (2005) Neuronal Growth Cones, Developmental & Cell Biology Monograph Series, Paperback Cambridge University Press : 272

Wilson JM, Hartley R, Maxwell DJ, Todd AJ, Lieberam I, Kaltschmidt JA, Yoshida Y, Jessell TM, Brownstone RM (2005) Conditional rhythmicity of ventral spinal interneurons defined by expression of the Hb9 homeodomain protein. J Neurosci 25: 5710-9

Lieberam I, Agalliu D, Nagasawa T, Ericson J, Jessell TM (2005) A Cxcl12-CXCR4 chemokine signaling pathway defines the initial trajectory of mammalian motor axons. Neuron 47: 667-79

Huber AB, Kania A, Tran TS, Gu C, De Marco Garcia N, Lieberam I, Johnson D, Jessell TM, Ginty DD, Kolodkin AL (2005) Distinct roles for secreted semaphorin signaling in spinal motor axon guidance. Neuron 48: 949-64

Ireland MD, Lowe AS, Reavill C, James MF, Leslie RA, Williams SC (2005) Mapping the effects of the selective dopamine D2/D3 receptor agonist quinelorane using pharmacological magnetic resonance imaging. Neuroscience 133: 315-26

Wertheim B, Kraaijeveld AR, Schuster E, Blanc E, Hopkins M, Pletcher SD, Strand MR, Partridge L, Godfray HC (2005) Genome-wide gene expression in response to parasitoid attack in Drosophila. Genome Biol 6: R94

van Diepen MT, Spencer GE, van Minnen J, Gouwenberg Y, Bouwman J, Smit AB, van Kesteren RE (2005) The molluscan RING-finger protein L-TRIM is essential for neuronal outgrowth. Mol Cell Neurosci 29: 74-81

Knight RD, Javidan Y, Zhang T, Nelson S, Schilling TF (2005) AP2-dependent signals from the ectoderm regulate craniofacial development in the zebrafish embryo. Development 132: 3127-38

Sieburth D, Ch'ng Q, Dybbs M, Tavazoie M, Kennedy S, Wang D, Dupuy D, Rual JF, Hill DE, Vidal M, Ruvkun G, Kaplan JM (2005) Systematic analysis of genes required for synapse structure and function. Nature 436: 510-7

Li Z, McNulty DE, Marler KJ, Lim L, Hall C, Annan RS, Sacks DB (2005) IQGAP1 promotes neurite outgrowth in a phosphorylation-dependent manner. J Biol Chem 280: 13871-8

Marler KJ, Kozma R, Ahmed S, Dong JM, Hall C, Lim L (2005) Outgrowth of neurites from NIE-115 neuroblastoma cells is prevented on repulsive substrates through the action of PAK. Mol Cell Biol 25: 5226-41

Johansson M, Olkkonen VM (2005) Assays for interaction between Rab7 and oxysterol binding protein related protein 1L (ORP1L). Methods Enzymol 403: 743-58

Johansson M, Lehto M, Tanhuanpää K, Cover TL, Olkkonen VM (2005) The oxysterol-binding protein homologue ORP1L interacts with Rab7 and alters functional properties of late endocytic compartments. Mol Biol Cell 16: 5480-92

Staudt N, Molitor A, Somogyi K, Mata J, Curado S, Eulenberg K, Meise M, Siegmund T, Häder T, Hilfiker A, Brönner G, Ephrussi A, Rørth P, Cohen SM, Fellert S, Chung HR, Piepenburg O, Schäfer U, Jäckle H, Vorbrüggen G (2005) Gain-of-function screen for genes that affect Drosophila muscle pattern formation. PLoS Genet 1: e55

Pelayo R, Hirose J, Huang J, Garrett KP, Delogu A, Busslinger M, Kincade PW (2005) Derivation of 2 categories of plasmacytoid dendritic cells in murine bone marrow. Blood 105: 4407-15

Michalovich D, Fagan R (2005) Bioinformatic approaches to assigning protein function from novel sequence data. Methods Mol Med 104: 313-32

Fernandes MS, Pierron V, Michalovich D, Astle S, Thornton S, Peltoketo H, Lam EW, Gellersen B, Huhtaniemi I, Allen J, Brosens JJ (2005) Regulated expression of putative membrane progestin receptor homologues in human endometrium and gestational tissues. J Endocrinol 187: 89-101

Menon SD, Osman Z, Chenchill K, Chia W (2005) A positive feedback loop between Dumbfounded and Rolling pebbles leads to myotube enlargement in Drosophila. J Cell Biol 169: 909-20

Meyer MP, Trimmer JS, Gilthorpe JD, Smith SJ (2005) Characterization of zebrafish PSD-95 gene family members. J Neurobiol 63: 91-105

Araújo SJ, Aslam H, Tear G, Casanova J (2005) mummy/cystic encodes an enzyme required for chitin and glycan synthesis, involved in trachea, embryonic cuticle and CNS development--analysis of its role in Drosophila tracheal morphogenesis. Dev Biol 288: 179-93

Hammond R, Vivancos V, Naeem A, Chilton J, Mambetisaeva E, Mambitisaeva E, Andrews W, Sundaresan V, Guthrie S (2005) Slit-mediated repulsion is a key regulator of motor axon pathfinding in the hindbrain. Development 132: 4483-95

Coppola E, Pattyn A, Guthrie SC, Goridis C, Studer M (2005) Reciprocal gene replacements reveal unique functions for Phox2 genes during neural differentiation. EMBO J 24: 4392-403

Kiecker C, Lumsden A (2005) Compartments and their boundaries in vertebrate brain development. Nat Rev Neurosci 6: 553-64

Schubert FR, Lumsden A (2005) Transcriptional control of early tract formation in the embryonic chick midbrain. Development 132: 1785-93

Wilson L, Maden M (2005) The mechanisms of dorsoventral patterning in the vertebrate neural tube. Dev Biol 282: 1-13

Reijntjes S, Blentic A, Gale E, Maden M (2005) The control of morphogen signalling: regulation of the synthesis and catabolism of retinoic acid in the developing embryo. Dev Biol 285: 224-37

Norton WH, Mangoli M, Lele Z, Pogoda HM, Diamond B, Mercurio S, Russell C, Teraoka H, Stickney HL, Rauch GJ, Heisenberg CP, Houart C, Schilling TF, Frohnhoefer HG, Rastegar S, Neumann CJ, Gardiner RM, Strähle U, Geisler R, Rees M, Talbot WS, Wilson SW (2005) Monorail/Foxa2 regulates floorplate differentiation and specification of oligodendrocytes, serotonergic raphé neurones and cranial motoneurones. Development 132: 645-58

Cavodeassi F, Carreira-Barbosa F, Young RM, Concha ML, Allende ML, Houart C, Tada M, Wilson SW (2005) Early stages of zebrafish eye formation require the coordinated activity of Wnt11, Fz5, and the Wnt/beta-catenin pathway. Neuron 47: 43-56

Wang N-Z, Donoghue PCJ, Smith MM and Sansom IJ (2005) The histology of the galeaspid dermal skeleton and endoskeleton and the origin and early evolution of the vertebrate cranial skeleton. J. Vert. Palaeont. 25: 745-756

Sansom IJ, Nian Zhong W and Smith MM (2005) The histology and affinities of sinacanthid (Gnathostomata)f ishes. Primitive gnathostomes from the Silurian of China. Zool. J. Linn. Soc. 144: 379-386

Johanson Z, Smith MM (2005) Origin and evolution of gnathostome dentitions: a question of teeth and pharyngeal denticles in placoderms. Biol Rev Camb Philos Soc 80: 303-45