Publications

2009

Cardona A, Larsen C, Hartenstein V (2009) Neuronal fiber tracts connecting the brain and ventral nerve cord of the early Drosophila larva. J Comp Neurol
Larsen C, Shy D, Spindler SR, Fung S, Pereanu W, Younossi-Hartenstein A, Hartenstein V (2009) Patterns of growth, axonal extension and axonal arborization of neuronal lineages in the developing Drosophila brain. Dev Biol
Thompson H, Blentic A, Watson S, Begbie J, Graham A (2009) The formation of the superior and jugular ganglia: Insights into the generation of sensory neurons by the neural crest. Dev Dyn
Graham A (2009) Melanocyte production: dark side of the Schwann cell. Curr Biol
Rallis A, Moore C, Ng J (2009) Signal strength and signal duration define two distinct aspects of JNK-regulated axon stability. Dev Biol
Malin S, McManus S, Cobaleda C, Novatchkova M, Delogu A, Bouillet P, Strasser A, Busslinger M (2009) Role of STAT5 in controlling cell survival and immunoglobulin gene recombination during pro-B cell development. Nat Immunol
Scholpp S, Delogu A, Gilthorpe J, Peukert D, Schindler S, Lumsden A (2009) Her6 regulates the neurogenetic gradient and neuronal identity in the thalamus. Proc Natl Acad Sci U S A
Zhou B, Williams DW, Altman J, Riddiford LM, Truman JW (2009) Temporal patterns of broad isoform expression during the development of neuronal lineages in Drosophila. Neural Dev
Jackson RE, Eickholt BJ (2009) Semaphorin signalling. Curr Biol
Kreis P, van Diepen MT, Eickholt BJ (2009) Regulation of PTEN in neurons by myosin-based transport mechanisms. Adv Enzyme Regul
Clarke J (2009) Live imaging of development in fish embryos. Semin Cell Dev Biol
Kriebitz NN, Kiecker C, McCormick L, Lumsden A, Graham A, Bell E (2009) PRDC regulates placode neurogenesis in chick by modulating BMP signalling. Dev Biol
Geraldo S, Gordon-Weeks PR (2009) Cytoskeletal dynamics in growth-cone steering. J Cell Sci
Brierley DJ, Blanc E, Reddy OV, Vijayraghavan K, Williams DW (2009) Dendritic targeting in the leg neuropil of Drosophila: the role of midline signalling molecules in generating a myotopic map. PLoS Biol
Quinlan R, Graf M, Mason I, Lumsden A, Kiecker C (2009) Complex and dynamic patterns of Wnt pathway gene expression in the developing chick forebrain. Neural Dev
Wood-Kaczmar A, Kraus M, Ishiguro K, Philpott KL, Gordon-Weeks PR (2009) An alternatively spliced form of glycogen synthase kinase-3beta is targeted to growing neurites and growth cones. Mol Cell Neurosci
Yaguchi Y, Yu T, Ahmed MU, Berry M, Mason I, Basson MA (2009) Fibroblast growth factor (FGF) gene expression in the developing cerebellum suggests multiple roles for FGF signaling during cerebellar morphogenesis and development. Dev Dyn
Scales TM, Lin S, Kraus M, Goold RG, Gordon-Weeks PR (2009) Nonprimed and DYRK1A-primed GSK3{beta}-phosphorylation sites on MAP1B regulate microtubule dynamics in growing axons. J Cell Sci
Nikolic K, Grossman N, Grubb MS, Burrone J, Toumazou C, Degenaar P (2009) Photocycles of channelrhodopsin-2. Photochem Photobiol
Fredj NB, Burrone J (2009) A resting pool of vesicles is responsible for spontaneous vesicle fusion at the synapse. Nat Neurosci
Degenaar P, Grossman N, Memon MA, Burrone J, Dawson M, Drakakis E, Neil M, Nikolic K (2009) Optobionic vision--a new genetically enhanced light on retinal prosthesis. J Neural Eng
Clarke J (2009) Role of polarized cell divisions in zebrafish neural tube formation. Curr Opin Neurobiol
Tawk M, Bianco IH, Clarke JD (2009) Focal electroporation in zebrafish embryos and larvae. Methods Mol Biol
Paridaen JT, Danesin C, Elas AT, van de Water S, Houart C, Zivkovic D (2009) Apc1-mediated antagonism of Wnt/beta-catenin signaling is required for retino-tectal pathfinding in the zebrafish. Zebrafish
Danesin C, Peres JN, Johansson M, Snowden V, Cording A, Papalopulu N, Houart C (2009) Integration of telencephalic Wnt and hedgehog signaling center activities by Foxg1. Dev Cell
Paridaen JT, Danesin C, Elas AT, van de Water S, Houart C, Zivkovic D (2009) Apc1 is required for maintenance of local brain organizers and dorsal midbrain survival. Dev Biol
Robles E, Smith SJ, Meyer MP (2009) Synaptic Precursors: Filopodia. Encyclopedia of Neuroscience, Elsevier.
Vivancos V, Chen P, Spassky N, Qian D, Dabdoub A, Kelley M, Studer M, Guthrie S (2009) Wnt activity guides facial branchiomotor neuron migration, and involves the PCP pathway and JNK and ROCK kinases. Neural Dev
Chambers D, Wilson LJ, Alfonsi F, Hunter E, Saxena U, Blanc E, Lumsden A (2009) Rhombomere-specific analysis reveals the repertoire of genetic cues expressed across the developing hindbrain. Neural Dev
Tolhurst DJ, Smyth D, Thompson ID (2009) The sparseness of neuronal responses in ferret primary visual cortex. J Neurosci
Smith MM, Fraser GJ, Mitsiadis TA (2009) Dental lamina as source of odontogenic stem cells: evolutionary origins and developmental control of tooth generation in gnathostomes. J Exp Zoolog B Mol Dev Evol
Smith MM, Fraser GJ, Chaplin N, Hobbs C, Graham A (2009) Reiterative pattern of sonic hedgehog expression in the catshark dentition reveals a phylogenetic template for jawed vertebrates. Proc Biol Sci
Sharpe, P. and Mason, I. (2009) Molecular Embryology ­ Methods and Protocols". Series: Methods in Molecular Biology Humana Press, Totowa, NJ. 2nd Edition. Approx 400pp

2008

Brill MS, Snapyan M, Wohlfrom H, Ninkovic J, Jawerka M, Mastick GS, Ashery-Padan R, Saghatelyan A, Berninger B, Götz M (2008) A dlx2- and pax6-dependent transcriptional code for periglomerular neuron specification in the adult olfactory bulb. J Neurosci
Bergami M, Santi S, Formaggio E, Cagnoli C, Verderio C, Blum R, Berninger B, Matteoli M, Canossa M (2008) Uptake and recycling of pro-BDNF for transmitter-induced secretion by cortical astrocytes. J Cell Biol
Khan AG, Thattai M, Bhalla US (2008) Odor representations in the rat olfactory bulb change smoothly with morphing stimuli. Neuron
López-Bendito G, Sánchez-Alcañiz JA, Pla R, Borrell V, Picó E, Valdeolmillos M, Marín O (2008) Chemokine signaling controls intracortical migration and final distribution of GABAergic interneurons. J Neurosci

Nóbrega-Pereira S, Kessaris N, Du T, Kimura S, Anderson SA, Marín O (2008) Postmitotic Nkx2-1 controls the migration of telencephalic interneurons by direct repression of guidance receptors. Neuron

Makeyev EV, Maniatis T (2008) Multilevel regulation of gene expression by microRNAs. Science
Plachez C, Andrews W, Liapi A, Knoell B, Drescher U, Mankoo B, Zhe L, Mambetisaeva E, Annan A, Bannister L, Parnavelas JG, Richards LJ, Sundaresan V (2008) Robos are required for the correct targeting of retinal ganglion cell axons in the visual pathway of the brain. Mol Cell Neurosci
Williams RH, Alexopoulos H, Jensen LT, Fugger L, Burdakov D (2008) Adaptive sugar sensors in hypothalamic feeding circuits. Proc Natl Acad Sci U S A
O'Leary DD, Sahara S (2008) Genetic regulation of arealization of the neocortex. Curr Opin Neurobiol
Morice E, Andreae LC, Cooke SF, Vanes L, Fisher EM, Tybulewicz VL, Bliss TV (2008) Preservation of long-term memory and synaptic plasticity despite short-term impairments in the Tc1 mouse model of Down syndrome. Learn Mem
Buckley CE, Goldsmith P, Franklin RJ (2008) Zebrafish myelination: a transparent model for remyelination? Dis Model Mech
Tear G (2008) Dynein branches out. Nat Cell Biol
Larsen C, Bardet PL, Vincent JP, Alexandre C (2008) Specification and positioning of parasegment grooves in Drosophila. Dev Biol
Bianco IH, Carl M, Russell C, Clarke JD, Wilson SW (2008) Brain asymmetry is encoded at the level of axon terminal morphology. Neural Dev
Clarke JD, Jayasinghe SN (2008) Bio-electrosprayed multicellular zebrafish embryos are viable and develop normally. Biomed Mater
Kosodo Y, Toida K, Dubreuil V, Alexandre P, Schenk J, Kiyokage E, Attardo A, Mora-Bermúdez F, Arii T, Clarke JD, Huttner WB (2008) Cytokinesis of neuroepithelial cells can divide their basal process before anaphase. EMBO J
Eickholt BJ (2008) Functional diversity and mechanisms of action of the semaphorins. Development
Ch'ng Q, Sieburth D, Kaplan JM (2008) Profiling synaptic proteins identifies regulators of insulin secretion and lifespan. PLoS Genet
Kundrát M, Joss JM, Smith MM (2008) Fate mapping in embryos of Neoceratodus forsteri reveals cranial neural crest participation in tooth development is conserved from lungfish to tetrapods. Evol Dev
Smith MM, Okabe M, Joss J (2008) Spatial and temporal pattern for the dentition in the Australian lungfish revealed with sonic hedgehog expression profile. Proc Biol Sci
Donoghue PC, Graham A, Kelsh RN (2008) The origin and evolution of the neural crest. Bioessays
Canning CA, Lee L, Luo SX, Graham A, Jones CM (2008) Neural tube derived Wnt signals cooperate with FGF signaling in the formation and differentiation of the trigeminal placodes. Neural Develop
Ng J (2008) TGF{beta} signals regulate axonal development through distinct Smad-independent mechanisms. Development
Mason I (2008) The avian embryo: an overview. Methods Mol Biol
Chambers D, Lumsden A (2008) Profiling gene transcription in the developing embryo: microarray analysis on gene chips. Methods Mol Biol
Mason I (2008) Chick embryos: incubation and isolation. Methods Mol Biol
Mahmood R, Mason I (2008) In-situ hybridization of radioactive riboprobes to RNA in tissue sections. Methods Mol Biol
Mason I (2008) Immunohistochemistry on whole embryos. Methods Mol Biol
Graham A (2008) Whole embryo assays for programmed cell death. Methods Mol Biol
Graham A (2008) RT-PCR on embryos using degenerate oligonucleotide primers. Methods Mol Biol
Guthrie S (2008) Transplantation of avian neural tissue. Methods Mol Biol
Clarke JD (2008) Using fluorescent dyes for fate mapping, lineage analysis, and axon tracing in the chick embryo. Methods Mol Biol
Wingate RJ (2008) Microscopy and photomicrography techniques. Methods Mol Biol
Marler KJ, Becker-Barroso E, Martínez A, Llovera M, Wentzel C, Poopalasundaram S, Hindges R, Soriano E, Comella J, Drescher U (2008) A TrkB/EphrinA interaction controls retinal axon branching and synaptogenesis. J Neurosci
Lowe AS, Barker GJ, Beech JS, Ireland MD, Williams SC (2008) A method for removing global effects in small-animal functional MRI. NMR Biomed
Maggs AM, Huxley C, Hughes SM (2008) Nerve-dependent changes in skeletal muscle myosin heavy chain after experimental denervation and cross-reinnervation and in a demyelinating mouse model of Charcot-Marie-Tooth disease type 1A. Muscle Nerve
Minchin JE, Hughes SM (2008) Sequential actions of Pax3 and Pax7 drive xanthophore development in zebrafish neural crest. Dev Biol
Alonso Bde C, Lowe AS, Dear JP, Lee KC, Williams SC, Finnerty GT (2008) Sensory inputs from whisking movements modify cortical whisker maps visualized with functional magnetic resonance imaging. Cereb Cortex
Lowe AS, Thompson ID, Sibson NR (2008) Quantitative manganese tract tracing: dose-dependent and activity-independent terminal labelling in the mouse visual system. NMR Biomed
Russek-Blum N, Gutnick A, Nabel-Rosen H, Blechman J, Staudt N, Dorsky RI, Houart C, Levkowitz G (2008) Dopaminergic neuronal cluster size is determined during early forebrain patterning. Development
Alonso M, Ortega-Pérez I, Grubb MS, Bourgeois JP, Charneau P, Lledo PM (2008) Turning astrocytes from the rostral migratory stream into neurons: a role for the olfactory sensory organ. J Neurosci
Geraldo S, Khanzada UK, Parsons M, Chilton JK, Gordon-Weeks PR (2008) Targeting of the F-actin-binding protein drebrin by the microtubule plus-tip protein EB3 is required for neuritogenesis. Nat Cell Biol
Vashlishan AB, Madison JM, Dybbs M, Bai J, Sieburth D, Ch'ng Q, Tavazoie M, Kaplan JM (2008) An RNAi screen identifies genes that regulate GABA synapses. Neuron
Wong R, Piper MD, Blanc E, Partridge L (2008) Pitfalls of measuring feeding rate in the fruit fly Drosophila melanogaster. Nat Methods
Trevelyan AJ, Upton AL, Cordery PM, Thompson ID (2008) An experimentally induced duplication of retinotopic mapping within the hamster primary visual cortex. Eur J Neurosci
Harrison B, Kraus M, Burch L, Stevens C, Craig A, Gordon-Weeks P, Hupp TR (2008) DAPK-1 Binding to a Linear Peptide Motif in MAP1B Stimulates Autophagy and Membrane Blebbing. J Biol Chem
Watson S, Chambers D, Hobbs C, Doherty P, Graham A (2008) The endocannabinoid receptor, CB1, is required for normal axonal growth and fasciculation. Mol Cell Neurosci
Knight RD, Mebus K, Roehl HH (2008) Mandibular arch muscle identity is regulated by a conserved molecular process during vertebrate development. J Exp Zoolog B Mol Dev Evol
Alfonsi F, Filippi P, Salaun D, deLapeyrière O, Durbec P (2008) LIFR beta plays a major role in neuronal identity determination and glial differentiation in the mouse facial nucleus. Dev Biol
Virard I, Gubkina O, Alfonsi F, Durbec P (2008) Characterization of heterogeneous glial cell populations involved in dehydration-induced proliferation in the adult rat neurohypophysis. Neuroscience
Schwarz Q, Vieira JM, Howard B, Eickholt BJ, Ruhrberg C (2008) Neuropilin 1 and 2 control cranial gangliogenesis and axon guidance through neural crest cells. Development
Grubb MS, Nissant A, Murray K, Lledo PM (2008) Functional maturation of the first synapse in olfaction: development and adult neurogenesis. J Neurosci
Bannister R, McGonnell IM, Graham A, Thorndyke MC, Beesley PW (2008) Coelomic expression of a novel bone morphogenetic protein in regenerating arms of the brittle star Amphiura filiformis. Dev Genes Evol
van Diepen MT, Eickholt BJ (2008) Function of PTEN during the formation and maintenance of neuronal circuits in the brain. Dev Neurosci