Publications

2007

Williams RH, Jensen LT, Verkhratsky A, Fugger L, Burdakov D (2007) Control of hypothalamic orexin neurons by acid and CO2. Proc Natl Acad Sci U S A 104: 10685-90
O'Leary DD, Chou SJ, Sahara S (2007) Area patterning of the mammalian cortex. Neuron 56: 252-69
O'Leary DD, Chou SJ, Hamasaki T, Sahara S, Takeuchi A, Thuret S, Leingärtner A (2007) Regulation of laminar and area patterning of mammalian neocortex and behavioural implications. Novartis Found Symp 288: 141-59; discussion 159-64
Butler SJ, Tear G (2007) Getting axons onto the right path: the role of transcription factors in axon guidance. Development 134: 439-48
Sánchez-Soriano N, Tear G, Whitington P, Prokop A (2007) Drosophila as a genetic and cellular model for studies on axonal growth. Neural Dev 2: 9
Montrasio S, Mlodzik M, Fanto M (2007) A new allele uncovers the role of echinus in the control of ommatidial rotation in the Drosophila eye. Dev Dyn 236: 2936-42
Clarke J (2007) Cell migration: catapulting neurons from the ventricular zone? Curr Biol 17: R176-8
Tawk M, Araya C, Lyons DA, Reugels AM, Girdler GC, Bayley PR, Hyde DR, Tada M, Clarke JD (2007) A mirror-symmetric cell division that orchestrates neuroepithelial morphogenesis. Nature 446: 797-800
Brekke C, Morgan SC, Lowe AS, Meade TJ, Price J, Williams SC, Modo M (2007) The in vitro effects of a bimodal contrast agent on cellular functions and relaxometry. NMR Biomed 20: 77-89
Lowe AS, Beech JS, Williams SC (2007) Small animal, whole brain fMRI: innocuous and nociceptive forepaw stimulation. Neuroimage 35: 719-28
Ashioti M, Beech JS, Lowe AS, Hesselink MB, Modo M, Williams SC (2007) Multi-modal characterisation of the neocortical clip model of focal cerebral ischaemia by MRI, behaviour and immunohistochemistry. Brain Res 1145: 177-89
McAteer MA, Sibson NR, von Zur Muhlen C, Schneider JE, Lowe AS, Warrick N, Channon KM, Anthony DC, Choudhury RP (2007) In vivo magnetic resonance imaging of acute brain inflammation using microparticles of iron oxide. Nat Med 13: 1253-8
Vonrhein C, Blanc E, Roversi P, Bricogne G (2007) Automated structure solution with autoSHARP. Methods Mol Biol 364: 215-30
Schuster EF, Blanc E, Partridge L, Thornton JM (2007) Correcting for sequence biases in present/absent calls. Genome Biol 8: R125
Schuster EF, Blanc E, Partridge L, Thornton JM (2007) Estimation and correction of non-specific binding in a large-scale spike-in experiment. Genome Biol 8: R126
McElwee JJ, Schuster E, Blanc E, Piper MD, Thomas JH, Patel DS, Selman C, Withers DJ, Thornton JM, Partridge L, Gems D (2007) Evolutionary conservation of regulated longevity assurance mechanisms. Genome Biol 8: R132
Dolan J, Walshe K, Alsbury S, Hokamp K, O'Keeffe S, Okafuji T, Miller SF, Tear G, Mitchell KJ (2007) The extracellular leucine-rich repeat superfamily; a comparative survey and analysis of evolutionary relationships and expression patterns. BMC Genomics 8: 320
Bernstein HG, Smalla KH, Bogerts B, Gordon-Weeks PR, Beesley PW, Gundelfinger ED, Kreutz MR (2007) The immunolocalization of the synaptic glycoprotein neuroplastin differs substantially between the human and the rodent brain. Brain Res 1134: 107-12
Guthrie S (2007) Patterning and axon guidance of cranial motor neurons. Nat Rev Neurosci 8: 859-71
Hoffman TL, Javier AL, Campeau SA, Knight RD, Schilling TF (2007) Tfap2 transcription factors in zebrafish neural crest development and ectodermal evolution. J Exp Zoolog B Mol Dev Evol 308: 679-91
Ahmed A, Eickholt BJ (2007) Intracellular kinases in semaphorin signaling. Adv Exp Med Biol 600: 24-37
Eickholt BJ, Ahmed AI, Davies M, Papakonstanti EA, Pearce W, Starkey ML, Bilancio A, Need AC, Smith AJ, Hall SM, Hamers FP, Giese KP, Bradbury EJ, Vanhaesebroeck B (2007) Control of Axonal Growth and Regeneration of Sensory Neurons by the p110delta PI 3-Kinase. PLoS ONE 2: e869
Reber M, Hindges R, Lemke G (2007) Eph receptors and ephrin ligands in axon guidance. Adv Exp Med Biol 621: 32-49
Wilson LJ, Myat A, Sharma A, Maden M, Wingate RJ (2007) Retinoic acid is a potential dorsalising signal in the late embryonic chick hindbrain. BMC Dev Biol 7: 138
Guinazu MF, Chambers D, Lumsden A, Kiecker C (2007) Tissue interactions in the developing chick diencephalon. Neural Develop 2: 25
Chilton JK & Gordon-Weeks PR (2007) Role of microtubules and MAPs during neuritogenesis. In Intracellular Mechanisms for Neuritogenesis (de Curtis, I. ed) Springer : 57-88
Chambers D, Wilson L, Maden M, Lumsden A (2007) RALDH-independent generation of retinoic acid during vertebrate embryogenesis by CYP1B1. Development 134: 1369-83
Reijntjes S, Rodaway A, Maden M (2007) The retinoic acid metabolising gene, CYP26B1, patterns the cartilaginous cranial neural crest in zebrafish. Int J Dev Biol 51: 351-60
Stinchcombe SV, Maden M (2007) Retinoic Acid-induced Alveolar Regeneration: Critical Differences in Strain Sensitivity. Am J Respir Cell Mol Biol
Maden M (2007) Retinoic acid in the development, regeneration and maintenance of the nervous system. Nat Rev Neurosci 8: 755-65
Andreae LC, Peukert D, Lumsden A, Gilthorpe JD (2007) Analysis of Lrrn1 expression and its relationship to neuromeric boundaries during chick neural development. Neural Develop 2: 22
Upton AL, Cordery PM, Thompson ID (2007) Emergence of topography in the developing hamster retinocollicular projection: axial differences and the role of cell death. Eur J Neurosci 25: 2319-28
Suchanek M, Hynynen R, Wohlfahrt G, Lehto M, Johansson M, Saarinen H, Radzikowska A, Thiele C, Olkkonen VM (2007) The mammalian oxysterol-binding protein-related proteins (ORPs) bind 25-hydroxycholesterol in an evolutionarily conserved pocket. Biochem J 405: 473-80
Johansson M, Rocha N, Zwart W, Jordens I, Janssen L, Kuijl C, Olkkonen VM, Neefjes J (2007) Activation of endosomal dynein motors by stepwise assembly of Rab7-RILP-p150Glued, ORP1L, and the receptor betalll spectrin. J Cell Biol 176: 459-71
Maden M, Blentic A, Reijntjes S, Seguin S, Gale E, Graham A (2007) Retinoic acid is required for specification of the ventral eye field and for Rathke's pouch in the avian embryo. Int J Dev Biol 51: 191-200
Graham A (2007) Deconstructing the pharyngeal metamere. J Exp Zoolog B Mol Dev Evol
Graham A, Blentic A, Duque S, Begbie J (2007) Delamination of cells from neurogenic placodes does not involve an epithelial-to-mesenchymal transition. Development
Mann CJ, Osborn DP, Hughes SM (2007) Vestigial-like-2b (VITO-1b) and Tead-3a (Tef-5a) expression in zebrafish skeletal muscle, brain and notochord. Gene Expr Patterns 7: 827-836
Bron R, Vermeren M, Kokot N, Little GE, Mitchell KJ, Andrews W, Cohen J (2007) Boundary cap cells constrain spinal motor neuron somal migration at motor exit points by a semaphorin - plexin mechanism. Neural Develop 2: 21
Hinits Y, Hughes SM (2007) Mef2s are required for thick filament formation in nascent muscle fibres. Development 134: 2511-9
Hinits Y, Osborn DP, Carvajal JJ, Rigby PW, Hughes SM (2007) Mrf4 (myf6) is dynamically expressed in differentiated zebrafish skeletal muscle. Gene Expr Patterns
Wendl T, Adzic D, Schoenebeck JJ, Scholpp S, Brand M, Yelon D, Rohr KB (2007) Early developmental specification of the thyroid gland depends on han-expressing surrounding tissue and on FGF signals. Development 134: 2871-9
Scholpp S, Foucher I, Staudt N, Peukert D, Lumsden A, Houart C (2007) Otx1l, Otx2 and Irx1b establish and position the ZLI in the diencephalon. Development
Schebesta A, McManus S, Salvagiotto G, Delogu A, Busslinger GA, Busslinger M (2007) Transcription Factor Pax5 Activates the Chromatin of Key Genes Involved in B Cell Signaling, Adhesion, Migration, and Immune Function. Immunity
Mason I (2007) Initiation to end point: the multiple roles of fibroblast growth factors in neural development. Nat Rev Neurosci
Caneparo L, Huang YL, Staudt N, Tada M, Ahrendt R, Kazanskaya O, Niehrs C, Houart C (2007) Dickkopf-1 regulates gastrulation movements by coordinated modulation of Wnt/beta catenin and Wnt/PCP activities, through interaction with the Dally-like homolog Knypek. Genes Dev 21: 465-80
Staudt N, Houart C (2007) The Prethalamus Is Established during Gastrulation and Influences Diencephalic Regionalization. PLoS Biol 5: e69
Cosker KE, Eickholt BJ (2007) Phosphoinositide 3-kinase signalling events controlling axonal morphogenesis. Biochem Soc Trans 35: 207-10
Fazzari P, Penachioni J, Gianola S, Rossi F, Eickholt BJ, Maina F, Alexopoulou L, Sottile A, Comoglio PM, Flavell RA, Tamagnone L (2007) PlexinB1 plays a redundant role during mouse development and in tumour angiogenesis. BMC Dev Biol 7: 55
Cobaleda C, Schebesta A, Delogu A, Busslinger M (2007) Pax5: the guardian of B cell identity and function. Nat Immunol 8: 463-70
Canning CA, Lee L, Irving C, Mason I, Jones CM (2007) Sustained interactive Wnt and FGF signaling is required to maintain isthmic identity. Dev Biol 305: 276-86
Jin H, Tan S, Hermanowski J, Böhm S, Pacheco S, McCauley JM, Greener MJ, Hinits Y, Hughes SM, Sharpe PT, Roberts RG (2007) The dystrotelin, dystrophin and dystrobrevin superfamily: new paralogues and old isoforms. BMC Genomics 8: 19
McCormick LJ, Hutt JA, Hazan J, Houart C, Cohen J. (2007) The homeodomain transcription factor drg11 is expressed in primary sensory neurons and their putative CNS targets during embryonic development of the zebrafish Gene Expr Patterns 7(3): 289-96

2006

López-Bendito G, Cautinat A, Sánchez JA, Bielle F, Flames N, Garratt AN, Talmage DA, Role LW, Charnay P, Marín O, Garel S (2006) Tangential neuronal migration controls axon guidance: a role for neuregulin-1 in thalamocortical axon navigation. Cell 125: 127-42

Pla R, Borrell V, Flames N, Marín O (2006) Layer acquisition by cortical GABAergic interneurons is independent of Reelin signaling. J Neurosci 26: 6924-34

Borrell V, Marín O (2006) Meninges control tangential migration of hem-derived Cajal-Retzius cells via CXCL12/CXCR4 signaling. Nat Neurosci 9: 1284-93
Marín O, Valdeolmillos M, Moya F (2006) Neurons in motion: same principles for different shapes? Trends Neurosci 29: 655-61

Strøbaek D, Hougaard C, Johansen TH, Sørensen US, Nielsen EØ, Nielsen KS, Taylor RD, Pedarzani P, Christophersen P (2006) Inhibitory gating modulation of small conductance Ca2+-activated K+ channels by the synthetic compound (R)-N-(benzimidazol-2-yl)-1,2,3,4-tetrahydro-1-naphtylamine (NS8593) reduces afterhyperpolarizing current in hippocampal CA1 neurons. Mol Pharmacol 70: 1771-82
Kiecker, C (2006) Head Induction. Chapter in "Cell Signaling and Growth Factors in Development". ed. K. Unsicker and K. Krieglstein, Wiley-VCH, Weinheim.
Danesin C, Agius E, Escalas N, Ai X, Emerson C, Cochard P, Soula C (2006) Ventral neural progenitors switch toward an oligodendroglial fate in response to increased Sonic hedgehog (Shh) activity: involvement of Sulfatase 1 in modulating Shh signaling in the ventral spinal cord. J Neurosci 26: 5037-48
Clarke J (2006) Cell migration: neurons go with the flow. Curr Biol 16: R337-9
Chambers D, Fishell G (2006) Functional genomics of early cortex patterning. Genome Biol 7: 202
Larsen C, Franch-Marro X, Hartenstein V, Alexandre C, Vincent JP (2006) An efficient promoter trap for detection of patterned gene expression and subsequent functional analysis in Drosophila. Proc Natl Acad Sci U S A 103: 17813-7
Mione M, Lele Z, Kwong CT, Concha ML, Clarke JD (2006) Expression of pcp4a in subpopulations of CNS neurons in zebrafish. J Comp Neurol 495: 769-87
Johanson Z, Smith MM, Joss J (2006) Early scale development in Heterodontus (Heterodontiformes; Chondrichthyes): a novel chondrichthyan scale pattern J. Acta. Zool. 88: 249-56
Selman C, Kerrison ND, Cooray A, Piper MD, Lingard SJ, Barton RH, Schuster EF, Blanc E, Gems D, Nicholson JK, Thornton JM, Partridge L, Withers DJ (2006) Coordinated multitissue transcriptional and plasma metabonomic profiles following acute caloric restriction in mice. Physiol Genomics 27: 187-200
McElwee JJ, Schuster E, Blanc E, Thornton J, Gems D (2006) Erratum to "Diapause-associated metabolic traits reiterated in long-lived daf-2 mutants in the nematode Caenorhabditis elegans" [Mech. Ageing Dev. 127 (5) (2006) 458-472]. Mech Ageing Dev 127: 922-36
Ahmad-Annuar A, Ciani L, Simeonidis I, Herreros J, Fredj NB, Rosso SB, Hall A, Brickley S, Salinas PC (2006) Signaling across the synapse: a role for Wnt and Dishevelled in presynaptic assembly and neurotransmitter release. J Cell Biol 174: 127-39
Zhu Y, Guthrie S, Murakami F (2006) Ephrin A/EphA controls the rostral turning polarity of a lateral commissural tract in chick hindbrain. Development 133: 3837-46
Knight RD, Schilling TF (2006) Cranial neural crest and development of the head skeleton. Adv Exp Med Biol 589: 120-33
Kuerner KM, Steinbeisser H (2006) Expression analysis of IGFBP-rP10, IGFBP-like and Mig30 in early Xenopus development. Dev Dyn 235: 2861-7
Lou X, Fang P, Li S, Hu RY, Kuerner KM, Steinbeisser H, Ding X (2006) Xenopus Tbx6 mediates posterior patterning via activation of Wnt and FGF signalling. Cell Res 16: 771-9
Lledo PM, Alonso M, Grubb MS (2006) Adult neurogenesis and functional plasticity in neuronal circuits. Nat Rev Neurosci 7: 179-93
Yip PK, Wong LF, Pattinson D, Battaglia A, Grist J, Bradbury EJ, Maden M, McMahon SB, Mazarakis ND (2006) Lentiviral vector expressing retinoic acid receptor beta2 promotes recovery of function after corticospinal tract injury in the adult rat spinal cord. Hum Mol Genet 15: 3107-18
So PL, Yip PK, Bunting S, Wong LF, Mazarakis ND, Hall S, McMahon S, Maden M, Corcoran JP (2006) Interactions between retinoic acid, nerve growth factor and sonic hedgehog signalling pathways in neurite outgrowth. Dev Biol 298: 167-75
Olkkonen VM, Johansson M, Suchanek M, Yan D, Hynynen R, Ehnholm C, Jauhiainen M, Thiele C, Lehto M (2006) The OSBP-related proteins (ORPs): global sterol sensors for co-ordination of cellular lipid metabolism, membrane trafficking and signalling processes? Biochem Soc Trans 34: 389-91
Staudt N, Fellert S, Chung HR, Jäckle H, Vorbrüggen G (2006) Mutations of the Drosophila zinc finger-encoding gene vielfältig impair mitotic cell divisions and cause improper chromosome segregation. Mol Biol Cell 17: 2356-65
Delogu A, Schebesta A, Sun Q, Aschenbrenner K, Perlot T, Busslinger M (2006) Gene repression by Pax5 in B cells is essential for blood cell homeostasis and is reversed in plasma cells. Immunity 24: 269-81