Publications

2012

Ahmed AI, Shtaya AB, Zaben MJ, Owens EV, Kiecker C, Gray WP (2012) Endogenous GFAP-positive neural stem/progenitor cells in the postnatal mouse cortex are activated following traumatic brain injury. J Neurotrauma
Dai W, Zhang G, Makeyev EV (2012) RNA-binding protein HuR autoregulates its expression by promoting alternative polyadenylation site usage. Nucleic Acids Res
Juvvuna PK, Khandelia P, Lee LM, Makeyev EV (2012) Argonaute identity defines the length of mature mammalian microRNAs. Nucleic Acids Res
Campion C, Gilthorpe J, Gogoi R, and Pini A (2012) Sulfated oligosaccharides for use in treatment of neurodegenerative diseases Published patent WO 2012160337

Yap K, Lim ZQ, Khandelia P, Friedman B, Makeyev EV (2012) Coordinated regulation of neuronal mRNA steady-state levels through developmentally controlled intron retention. Genes Dev
Borrell V, Cárdenas A, Ciceri G, Galcerán J, Flames N, Pla R, Nóbrega-Pereira S, García-Frigola C, Peregrín S, Zhao Z, Ma L, Tessier-Lavigne M, Marín O (2012) Slit/Robo signaling modulates the proliferation of central nervous system progenitors. Neuron
Writer MJ, Kyrtatos PG, Bienemann AS, Pugh JA, Lowe AS, Villegas-Llerena C, Kenny GD, White EA, Gill SS, McLeod CW, Lythgoe MF, Hart SL (2012) Lipid peptide nanocomplexes for gene delivery and magnetic resonance imaging in the brain. J Control Release
Hutson TH, Foster E, Dawes JM, Hindges R, Yáñez-Muñoz RJ, Moon LD (2012) Lentiviral vectors encoding short hairpin RNAs efficiently transduce and knockdown LINGO-1 but induce an interferon response and cytotoxicity in central nervous system neurones. J Gene Med
Oommen S, Otsuka-Tanaka Y, Imam N, Kawasaki M, Kawasaki K, Jalani-Ghazani F, Anderegg A, Awatramani R, Hindges R, Sharpe PT, Ohazama A (2012) Distinct roles of microRNAs in epithelium and mesenchyme during tooth development. Dev Dyn
Ertürk A, Mauch CP, Hellal F, Förstner F, Keck T, Becker K, Jährling N, Steffens H, Richter M, Hübener M, Kramer E, Kirchhoff F, Dodt HU, Bradke F (2012) Three-dimensional imaging of the unsectioned adult spinal cord to assess axon regeneration and glial responses after injury. Nat Med
Graham A, Richardson J (2012) Developmental and evolutionary origins of the pharyngeal apparatus. Evodevo
Ferrario JE, Baskaran P, Clark C, Hendry A, Lerner O, Hintze M, Allen J, Chilton JK, Guthrie S (2012) Axon guidance in the developing ocular motor system and Duane retraction syndrome depends on Semaphorin signaling via alpha2-chimaerin. Proc Natl Acad Sci U S A
Schöne C, Cao ZF, Apergis-Schoute J, Adamantidis A, Sakurai T, Burdakov D (2012) Optogenetic probing of fast glutamatergic transmission from hypocretin/orexin to histamine neurons in situ. J Neurosci
Butts T, Wilson L and Wingate RJ (2012) Specification of granule cells and Purkinje cells. in M. Manto D. Gruol N. Schmahmann N. Koibuchi and F. Rossi (eds.) Handbook of the Cerebellum and Cerebellar Disorders. Heidelberg: Springer Science and Business Media.
Broom ER, Gilthorpe JD, Butts T, Campo-Paysaa F, Wingate RJ (2012) The roof plate boundary is a bi-directional organiser of dorsal neural tube and choroid plexus development. Development
Folgueira M, Bayley P, Navratilova P, Becker TS, Wilson SW, Clarke JD (2012) Morphogenesis underlying the development of the everted teleost telencephalon. Neural Dev
Buckley CE, Ren X, Ward LC, Girdler GC, Araya C, Green MJ, Clark BS, Link BA, Clarke JD (2012) Mirror-symmetric microtubule assembly and cell interactions drive lumen formation in the zebrafish neural rod. EMBO J
Nikolaou N, Lowe AS, Walker AS, Abbas F, Hunter PR, Thompson ID, Meyer MP (2012) Parametric functional maps of visual inputs to the tectum. Neuron
Delogu A, Sellers K, Zagoraiou L, Bocianowska-Zbrog A, Mandal S, Guimera J, Rubenstein JL, Sugden D, Jessell T, Lumsden A (2012) Subcortical Visual Shell Nuclei Targeted by ipRGCs Develop from a Sox14+-GABAergic Progenitor and Require Sox14 to Regulate Daily Activity Rhythms. Neuron
Kiecker C, Lumsden A (2012) The Role of Organizers in Patterning the Nervous System. Annu Rev Neurosci
Andreae LC, Fredj NB, Burrone J (2012) Independent vesicle pools underlie different modes of release during neuronal development. J Neurosci
Maiorano NA, Hindges R (2012) Non-Coding RNAs in Retinal Development. Int J Mol Sci
Dun XP, Bandeira de Lima T, Allen J, Geraldo S, Gordon-Weeks P, Chilton JK (2012) Drebrin controls neuronal migration through the formation and alignment of the leading process. Mol Cell Neurosci
Santos R, Wu J, Hamilton JA, Pinter R, Hindges R, Calof AL (2012) Restoration of retinal development in vsx2 deficient mice by reduction of gdf11 levels. Adv Exp Med Biol
Cavodeassi F, Houart C (2012) Brain regionalization: of signaling centers and boundaries. Dev Neurobiol
Nikolaou N, Meyer MP (2012) Imaging circuit formation in zebrafish. Dev Neurobiol

2011

Heinrich C, Gascón S, Masserdotti G, Lepier A, Sanchez R, Simon-Ebert T, Schroeder T, Götz M, Berninger B (2011) Generation of subtype-specific neurons from postnatal astroglia of the mouse cerebral cortex. Nat Protoc
Blum R, Heinrich C, Sánchez R, Lepier A, Gundelfinger ED, Berninger B, Götz M (2011) Neuronal network formation from reprogrammed early postnatal rat cortical glial cells. Cereb Cortex
Costa MR, Ortega F, Brill MS, Beckervordersandforth R, Petrone C, Schroeder T, Götz M, Berninger B (2011) Continuous live imaging of adult neural stem cell division and lineage progression in vitro. Development
Egea V, von Baumgarten L, Schichor C, Berninger B, Popp T, Neth P, Goldbrunner R, Kienast Y, Winkler F, Jochum M, Ries C (2011) TNF-? respecifies human mesenchymal stem cells to a neural fate and promotes migration toward experimental glioma. Cell Death Differ
Ortega F, Costa MR, Simon-Ebert T, Schroeder T, Götz M, Berninger B (2011) Using an adherent cell culture of the mouse subependymal zone to study the behavior of adult neural stem cells on a single-cell level. Nat Protoc
Khandelia P, Yap K, Makeyev EV (2011) Streamlined platform for short hairpin RNA interference and transgenesis in cultured mammalian cells. Proc Natl Acad Sci U S A
Karnani MM, Apergis-Schoute J, Adamantidis A, Jensen LT, de Lecea L, Fugger L, Burdakov D (2011) Activation of central orexin/hypocretin neurons by dietary amino acids. Neuron
Sousa-Nunes R, Yee LL, Gould AP (2011) Fat cells reactivate quiescent neuroblasts via TOR and glial insulin relays in Drosophila. Nature
Sekar S, Verhoye M, Van Audekerke J, Vanhoutte G, Lowe AS, Blamire AM, Steckler T, Van der Linden A, Shoaib M (2011) Neuroadaptive responses to citalopram in rats using pharmacological magnetic resonance imaging. Psychopharmacology (Berl)
Sekar S, Van Audekerke J, Vanhoutte G, Lowe AS, Blamire AM, Van der Linden A, Steckler T, Shoaib M, Verhoye M (2011) Neuroanatomical targets of reboxetine and bupropion as revealed by pharmacological magnetic resonance imaging. Psychopharmacology (Berl)
Tuxworth RI, Chen H, Vivancos V, Carvajal N, Huang X, Tear G (2011) The Batten disease gene CLN3 is required for the response to oxidative stress. Hum Mol Genet
Brierley D, Rathore K, Vijayraghavan K, Williams D (2011) Developmental origins and architecture of Drosophila leg motoneurons. J Comp Neurol
Farley EK, Gale E, Chambers D, Li M (2011) Effects of in ovo electroporation on endogenous gene expression: genome-wide analysis. Neural Dev
Gennet N, Gale E, Nan X, Farley E, Takacs K, Oberwallner B, Chambers D, Li M (2011) Doublesex and mab-3-related transcription factor 5 promotes midbrain dopaminergic identity in pluripotent stem cells by enforcing a ventral-medial progenitor fate. Proc Natl Acad Sci U S A
Keck T, Scheuss V, Jacobsen RI, Wierenga CJ, Eysel UT, Bonhoeffer T, Hübener M (2011) Loss of sensory input causes rapid structural changes of inhibitory neurons in adult mouse visual cortex. Neuron
Calamita P, Fanto M (2011) Slimming down fat makes neuropathic hippo: the Fat/Hippo tumor suppressor pathway protects adult neurons through regulation of autophagy. Autophagy
Volpi V, Mackay D, Fanto M (2011) Single Drosophila ommatidium dissection and imaging. J Vis Exp
Tymanskyj SR, Scales TM, Gordon-Weeks PR (2011) MAP1B enhances microtubule assembly rates and axon extension rates in developing neurons. Mol Cell Neurosci
Tossell K, Andreae LC, Cudmore C, Lang E, Muthukrishnan U, Lumsden A, Gilthorpe JD, Irving C (2011) Lrrn1 is required for formation of the midbrain-hindbrain boundary and organiser through regulation of affinity differences between midbrain and hindbrain cells in chick. Dev Biol
Napoletano F, Occhi S, Calamita P, Volpi V, Blanc E, Charroux B, Royet J, Fanto M (2011) Polyglutamine Atrophin provokes neurodegeneration in Drosophila by repressing fat. EMBO J
Blentic A, Chambers D, Skinner A, Begbie J, Graham A (2011) The formation of the cranial ganglia by placodally-derived sensory neuronal precursors. Mol Cell Neurosci
Grevellec A, Graham A, Tucker AS (2011) Shh signalling restricts the expression of Gcm2 and controls the position of the developing parathyroids. Dev Biol
McGonnell IM, Graham A, Richardson J, Fish JL, Depew MJ, Dee CT, Holland PW, Takahashi T (2011) Evolution of the Alx homeobox gene family: parallel retention and independent loss of the vertebrate Alx3 gene. Evol Dev
Richardson J, Shono T, Okabe M, Graham A (2011) The presence of an embryonic opercular flap in amniotes. Proc Biol Sci
Grubb MS, Shu Y, Kuba H, Rasband MN, Wimmer VC, Bender KJ (2011) Short- and Long-Term Plasticity at the Axon Initial Segment. J Neurosci
Ch'ng Q (2011) Selecting synaptic partners: GRASPing the role of UNC-6/netrin. BMC Biol
Poopalasundaram S, Marler KJ, Drescher U (2011) EphrinA6 on chick retinal axons is a key component for p75(NTR)-dependent axon repulsion and TrkB-dependent axon branching. Mol Cell Neurosci
Tossell K, Kiecker C, Wizenmann A, Lang E, Irving C (2011) Notch signalling stabilises boundary formation at the midbrain-hindbrain organiser. Development
Hunter PR, Nikolaou N, Odermatt B, Williams PR, Drescher U, Meyer MP (2011) Localization of Cadm2a and Cadm3 proteins during development of the zebrafish nervous system. J Comp Neurol
Butts T, Chaplin N, Wingate RJ (2011) Can clues from evolution unlock the molecular development of the cerebellum? Mol Neurobiol

2010

Marthiens V, Kazanis I, Moss L, Long K, Ffrench-Constant C (2010) Adhesion molecules in the stem cell niche--more than just staying in shape? J Cell Sci
Heinrich C, Blum R, Gascón S, Masserdotti G, Tripathi P, Sánchez R, Tiedt S, Schroeder T, Götz M, Berninger B (2010) Directing astroglia from the cerebral cortex into subtype specific functional neurons. PLoS Biol
Khan AG, Parthasarathy K, Bhalla US (2010) Odor representations in the mammalian olfactory bulb. Wiley Interdiscip Rev Syst Biol Med
Martín-Ibáñez R, Crespo E, Urbán N, Sergent-Tanguy S, Herranz C, Jaumot M, Valiente M, Long JE, Pineda JR, Andreu C, Rubenstein JL, Marín O, Georgopoulos K, Mengod G, Fariñas I, Bachs O, Alberch J, Canals JM (2010) Ikaros-1 couples cell cycle arrest of late striatal precursors with neurogenesis of enkephalinergic neurons. J Comp Neurol

Valiente M, Marín O (2010) Neuronal migration mechanisms in development and disease. Curr Opin Neurobiol

Marín O, Valiente M, Ge X, Tsai LH (2010) Guiding neuronal cell migrations. Cold Spring Harb Perspect Biol

Nóbrega-Pereira S, Gelman D, Bartolini G, Pla R, Pierani A, Marín O (2010) Origin and molecular specification of globus pallidus neurons. J Neurosci

Fazzari P, Paternain AV, Valiente M, Pla R, Luján R, Lloyd K, Lerma J, Marín O, Rico B (2010) Control of cortical GABA circuitry development by Nrg1 and ErbB4 signalling. Nature

Gelman DM, Marín O (2010) Generation of interneuron diversity in the mouse cerebral cortex. Eur J Neurosci

Murray A, Naeem A, Barnes SH, Drescher U, Guthrie S (2010) Slit and Netrin-1 guide cranial motor axon pathfinding via Rho-kinase, myosin light chain kinase and myosin II. Neural Dev
Barnes SH, Price SR, Wentzel C, Guthrie SC (2010) Cadherin-7 and cadherin-6B differentially regulate the growth, branching and guidance of cranial motor axons. Development
Sousa-Nunes R, Cheng LY, Gould AP (2010) Regulating neural proliferation in the Drosophila CNS. Curr Opin Neurobiol
Sousa-Nunes R, Somers WG (2010) Phosphorylation and dephosphorylation events allow for rapid segregation of fate determinants during Drosophila neuroblast asymmetric divisions. Commun Integr Biol
Chang KC, Garcia-Alvarez G, Somers G, Sousa-Nunes R, Rossi F, Lee YY, Soon SB, Gonzalez C, Chia W, Wang H (2010) Interplay between the transcription factor Zif and aPKC regulates neuroblast polarity and self-renewal. Dev Cell
Lowry JP, Griffin K, McHugh SB, Lowe AS, Tricklebank M, Sibson NR (2010) Real-time electrochemical monitoring of brain tissue oxygen: a surrogate for functional magnetic resonance imaging in rodents. Neuroimage
Sloan HL, Austin VC, Blamire AM, Schnupp JW, Lowe AS, Allers KA, Matthews PM, Sibson NR (2010) Regional differences in neurovascular coupling in rat brain as determined by fMRI and electrophysiology. Neuroimage
Wierenga CJ, Müllner FE, Rinke I, Keck T, Stein V, Bonhoeffer T (2010) Molecular and electrophysiological characterization of GFP-expressing CA1 interneurons in GAD65-GFP mice. PLoS One
Roth M, Bonev B, Lindsay J, Lea R, Panagiotaki N, Houart C, Papalopulu N (2010) FoxG1 and TLE2 act cooperatively to regulate ventral telencephalon formation. Development
Fassier C, Hutt JA, Scholpp S, Lumsden A, Giros B, Nothias F, Schneider-Maunoury S, Houart C, Hazan J (2010) Zebrafish atlastin controls motility and spinal motor axon architecture via inhibition of the BMP pathway. Nat Neurosci
Alexandre P, Reugels AM, Barker D, Blanc E, Clarke JD (2010) Neurons derive from the more apical daughter in asymmetric divisions in the zebrafish neural tube. Nat Neurosci
Picone R, Ren X, Ivanovitch KD, Clarke JD, McKendry RA, Baum B (2010) A polarised population of dynamic microtubules mediates homeostatic length control in animal cells. PLoS Biol
Qu Y, Glasco DM, Zhou L, Sawant A, Ravni A, Fritzsch B, Damrau C, Murdoch JN, Evans S, Pfaff SL, Formstone C, Goffinet AM, Chandrasekhar A, Tissir F (2010) Atypical cadherins Celsr1-3 differentially regulate migration of facial branchiomotor neurons in mice. J Neurosci

Alcedo J, Maier W, Ch'ng Q (2010) Sensory influence on homeostasis and lifespan: molecules and circuits. Adv Exp Med Biol
Paudyal A, Damrau C, Patterson VL, Ermakov A, Formstone C, Lalanne Z, Wells S, Lu X, Norris DP, Dean CH, Henderson DJ, Murdoch JN (2010) The novel mouse mutant, chuzhoi, has disruption of Ptk7 protein and exhibits defects in neural tube, heart and lung development and abnormal planar cell polarity in the ear. BMC Dev Biol

Marler KJ, Poopalasundaram S, Broom ER, Wentzel C, Drescher U (2010) Pro-neurotrophins secreted from retinal ganglion cell axons are necessary for ephrinA-p75NTR-mediated axon guidance. Neural Dev
Soutar MP, Kim WY, Williamson R, Peggie M, Hastie CJ, McLauchlan H, Snider WD, Gordon-Weeks PR, Sutherland C (2010) Evidence that glycogen synthase kinase-3 isoforms have distinct substrate preference in the brain. J Neurochem
Grubb MS, Burrone J (2010) Channelrhodopsin-2 localised to the axon initial segment. PLoS One
Lin HH, Bell E, Uwanogho D, Perfect LW, Noristani H, Bates TJ, Snetkov V, Price J, Sun YM (2010) Neuronatin promotes neural lineage in ESCs via Ca(2+) signaling. Stem Cells
Ben Fredj N, Hammond S, Otsuna H, Chien CB, Burrone J, Meyer MP (2010) Synaptic activity and activity-dependent competition regulates axon arbor maturation, growth arrest, and territory in the retinotectal projection. J Neurosci
Grubb MS, Burrone J (2010) Building and maintaining the axon initial segment. Curr Opin Neurobiol
Grubb MS, Burrone J (2010) Activity-dependent relocation of the axon initial segment fine-tunes neuronal excitability. Nature
Graham A (2010) Developmental homoplasy: convergence in cellular differentiation. J Anat
Yates LL, Schnatwinkel C, Murdoch JN, Bogani D, Formstone CJ, Townsend S, Greenfield A, Niswander LA, Dean CH (2010) The PCP genes Celsr1 and Vangl2 are required for normal lung branching morphogenesis. Hum Mol Genet

Formstone CJ, Moxon C, Murdoch J, Little P, Mason I (2010) Basal enrichment within neuroepithelia suggests novel function(s) for Celsr1 protein. Mol Cell Neurosci

Tahirovic S, Hellal F, Neukirchen D, Hindges R, Garvalov BK, Flynn KC, Stradal TE, Chrostek-Grashoff A, Brakebusch C, Bradke F (2010) Rac1 regulates neuronal polarization through the WAVE complex. J Neurosci
Tymanskyj SR, Lin S, Gordon-Weeks PR (2010) Evolution of the spatial distribution of MAP1B phosphorylation sites in vertebrate neurons. J Anat
Fanto M and Charroux B (2010) Book chapter: Atrophin-1. In: Kompoliti K, and Verhagen Metman L (eds.) Encyclopedia of Movement Disorders. Oxford: Academic Press
Charroux B & Fanto M (2010) The fine line between waste disposal and recycle. Autophagy, In press