Publications
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2022
Yap K, Chung TH, Makeyev EV (2022)
Analysis of RNA-containing compartments by hybridization and proximity labeling in cultured human cells.
STAR Protoc 3: 101139
Yap K, Chung TH, Makeyev EV (2022)
Hybridization-proximity labeling reveals spatially ordered interactions of nuclear RNA compartments.
Mol Cell 82: 463-478.e11
Barkus C, Bergmann C, Branco T, Carandini M, Chadderton PT, Galiñanes GL, Gilmour G, Huber D, Huxter JR, Khan AG, King AJ, Maravall M, O'Mahony T, Ragan CI, Robinson ESJ, Schaefer AT, Schultz SR, Sengpiel F, Prescott MJ (2022)
Refinements to rodent head fixation and fluid/food control for neuroscience
Journal of Neuroscience Methods
2021
Llorca A, Marín O (2021)
Orchestrated freedom: new insights into cortical neurogenesis.
Curr Opin Neurobiol 66: 48-56
Ucar B, Kajtez J, Foidl BM, Eigel D, Werner C, Long KR, Emnéus J, Bizeau J, Lomora M, Pandit A, Newland B, Humpel C (2021)
Biomaterial based strategies to reconstruct the nigrostriatal pathway in organotypic slice co-cultures.
Acta Biomater 121: 250-262
Pollak TA, Vincent A, Iyegbe C, Coutinho E, Jacobson L, Rujescu D, Stone J, Jezequel J, Rogemond V, Jamain S, Groc L, David A, Egerton A, Kahn RS, Honnorat J, Dazzan P, Leboyer M, McGuire P (2021)
Relationship Between Serum NMDA Receptor Antibodies and Response to Antipsychotic Treatment in First-Episode Psychosis.
Biol Psychiatry 90: 9-15
Patkee PA, Baburamani AA, Long KR, Dimitrova R, Ciarrusta J, Allsop J, Hughes E, Kangas J, McAlonan GM, Rutherford MA, De Vita E (2021)
Neurometabolite mapping highlights elevated myo-inositol profiles within the developing brain in down syndrome.
Neurobiol Dis 153: 105316
Díaz-Caneja CM, State MW, Hagerman RJ, Jacquemont S, Marín O, Bagni C, Umbricht D, Simonoff E, de Andrés-Trelles F, Kaale A, Pandina G, Gómez-Mancilla B, Wang PP, Cusak J, Siafis S, Leucht S, Parellada M, Loth E, Charman T, Buitelaar JK, Murphy D, Arango C (2021)
A white paper on a neurodevelopmental framework for drug discovery in autism and other neurodevelopmental disorders.
Eur Neuropsychopharmacol 48: 49-88
Herrero-Navarro Á, Puche-Aroca L, Moreno-Juan V, Sempere-Ferràndez A, Espinosa A, Susín R, Torres-Masjoan L, Leyva-Díaz E, Karow M, Figueres-Oñate M, López-Mascaraque L, López-Atalaya JP, Berninger B, López-Bendito G (2021)
Astrocytes and neurons share region-specific transcriptional signatures that confer regional identity to neuronal reprogramming.
Sci Adv 7
Conde-Dusman MJ, Dey PN, Elía-Zudaire Ó, Rabaneda LG, García-Lira C, Grand T, Briz V, Velasco ER, Andero R, Niñerola S, Barco A, Paoletti P, Wesseling JF, Gardoni F, Tavalin SJ, Perez-Otaño I (2021)
Control of protein synthesis and memory by GluN3A-NMDA receptors through inhibition of GIT1/mTORC1 assembly.
Elife 10
Long KR, Huttner WB (2021)
The Role of the Extracellular Matrix in Neural Progenitor Cell Proliferation and Cortical Folding During Human Neocortex Development.
Front Cell Neurosci 15: 804649
Eigel D, Schuster R, Männel MJ, Thiele J, Panasiuk MJ, Andreae LC, Varricchio C, Brancale A, Welzel PB, Huttner WB, Werner C, Newland B, Long KR (2021)
Sulfonated cryogel scaffolds for focal delivery in ex-vivo brain tissue cultures.
Biomaterials 271: 120712
Shi Y, Wang M, Mi D, Lu T, Wang B, Dong H, Zhong S, Chen Y, Sun L, Zhou X, Ma Q, Liu Z, Wang W, Zhang J, Wu Q, Marín O, Wang X (2021)
Mouse and humans share conserved transcriptional programs for interneuron development
Science
Lentini C, d'Orange M, Marichal N, Trottmann MM, Vignoles R, Foucault L, Verrier C, Massera C, Raineteau O, Conzelmann KK, Rival-Gervier S, Depaulis A, Berninger B, Heinrich C (2021)
Reprogramming reactive glia into interneurons reduces chronic seizure activity in a mouse model of mesial temporal lobe epilepsy.
Cell Stem Cell 28: 2104-2121.e10
Braga L, Ali H, Secco I, Chiavacci E, Neves G, Goldhill D, Penn R, Jimenez-Guardeño JM, Ortega-Prieto AM, Bussani R, Cannatà A, Rizzari G, Collesi C, Schneider E, Arosio D, Shah AM, Barclay WS, Malim MH, Burrone J, Giacca M (2021)
Drugs that inhibit TMEM16 proteins block SARS-CoV-2 spike-induced syncytia.
Nature
Anette Wu, Vinay Maddula, Ann Chen Xi Yu, Rahul Goel, Haruna Shimizu, Chung-Liang Chien, Richard Wingate, Mandeep Gill Sagoo, Heike Kielstein, Hannes Traxler, Cecilia Brassett, Jens Waschke, Fransziska Vielmuth, Kevin Keay, Mina Zeroual, Takeshi Sakurai, Jorgen Olsen, Salma El-Batti, Suvi Viranta-Kovanen, Shuji Kitahara, Carol Kunzel, Paulette Bernd & Geoffroy P.J.C. Noel (2021)
An Observation of Healthcare Professions Students’ Perceptions During the COVID-19 Pandemic
Medical Science Educator
2020
Brann DH, Tsukahara T, Weinreb C, Lipovsek M, Van den Berge K, Gong B, Chance R, Macaulay IC, Chou HJ, Fletcher RB, Das D, Street K, de Bezieux HR, Choi YG, Risso D, Dudoit S, Purdom E, Mill J, Hachem RA, Matsunami H, Logan DW, Goldstein BJ, Grubb MS, Ngai J, Datta SR (2020)
Non-neuronal expression of SARS-CoV-2 entry genes in the olfactory system suggests mechanisms underlying COVID-19-associated anosmia.
Sci Adv 6
Briscoe J, Marín O (2020)
Looking at neurodevelopment through a big data lens.
Science 369
Court R, Namiki S, Armstrong JD, Börner J, Card G, Costa M, Dickinson M, Duch C, Korff W, Mann R, Merritt D, Murphey RK, Seeds AM, Shirangi T, Simpson JH, Truman JW, Tuthill JC, Williams DW, Shepherd D (2020)
A Systematic Nomenclature for the Drosophila Ventral Nerve Cord.
Neuron 107: 1071-1079.e2
Sahara S, Kodama T, Stevens CF (2020)
A common rule governing differentiation kinetics of mouse cortical progenitors.
Proc Natl Acad Sci U S A 117: 15221-15229
Moore R, Alexandre P (2020)
Delta-Notch Signaling: The Long and The Short of a Neuron's Influence on Progenitor Fates.
J Dev Biol 8
Deryckere A, Stappers E, Dries R, Peyre E, van den Berghe V, Conidi A, Zampeta FI, Francis A, Bresseleers M, Stryjewska A, Vanlaer R, Maas E, Smal IV, van IJcken WFJ, Grosveld FG, Nguyen L, Huylebroeck D, Seuntjens E (2020)
Multifaceted actions of Zeb2 in postnatal neurogenesis from the ventricular-subventricular zone to the olfactory bulb.
Development
Kainov YA, Makeyev EV (2020)
A transcriptome-wide antitermination mechanism sustaining identity of embryonic stem cells.
Nat Commun 11: 361
Shum C, Dutan L, Annuario E, Warre-Cornish K, Taylor SE, Taylor RD, Andreae LC, Buckley NJ, Price J, Bhattacharyya S, Srivastava DP (2020)
Δ9-tetrahydrocannabinol and 2-AG decreases neurite outgrowth and differentially affects ERK1/2 and Akt signaling in hiPSC-derived cortical neurons.
Mol Cell Neurosci 103: 103463
Wu A, Noël GPJC, Wingate R, Kielstein H, Sakurai T, Viranta-Kovanen S, Chien C-L, Traxler H, Waschke J, Vielmuth F, Sagoo MG, Kitahara S, Kato Y, Keay KA, Olsen J, Bernd P (2020)
An International Partnership of 12 Anatomy Departments: Improving Global Health through Internationalization of Medical Education.
Annals of Global Health 86(1): 27: 1-14
2019
Namba T, Dóczi J, Pinson A, Xing L, Kalebic N, Wilsch-Bräuninger M, Long KR, Vaid S, Lauer J, Bogdanova A, Borgonovo B, Shevchenko A, Keller P, Drechsel D, Kurzchalia T, Wimberger P, Chinopoulos C, Huttner WB (2019)
Human-Specific ARHGAP11B Acts in Mitochondria to Expand Neocortical Progenitors by Glutaminolysis.
Neuron
Hanzel M, Rook V, Wingate RJT (2019)
Mitotic granule cell precursors undergo highly dynamic morphological transitions throughout the external germinal layer of the chick cerebellum.
Sci Rep 9: 15218
Bachmann C, Noreen F, Voermans NC, Schär PL, Vissing J, Fock JM, Bulk S, Kusters B, Moore SA, Beggs AH, Mathews KD, Meyer M, Genetti CA, Meola G, Cardani R, Mathews E, Jungbluth H, Muntoni F, Zorzato F, Treves S (2019)
Aberrant regulation of epigenetic modifiers contributes to the pathogenesis in patients with selenoprotein N-related myopathies.
Hum Mutat 40: 962-974
Cai P, Li Z, Keneth ES, Wang L, Wan C, Jiang Y, Hu B, Wu YL, Wang S, Lim CT, Makeyev EV, Magdassi S, Chen X (2019)
Differential Homeostasis of Sessile and Pendant Epithelium Reconstituted in a 3D-Printed "GeminiChip".
Adv Mater 31: e1900514
Thams S, Lowry ER, Larraufie MH, Spiller KJ, Li H, Williams DJ, Hoang P, Jiang E, Williams LA, Sandoe J, Eggan K, Lieberam I, Kanning KC, Stockwell BR, Henderson CE, Wichterle H (2019)
A Stem Cell-Based Screening Platform Identifies Compounds that Desensitize Motor Neurons to Endoplasmic Reticulum Stress.
Mol Ther 27: 87-101
Brosig A, Fuchs J, Ipek F, Kroon C, Schrötter S, Vadhvani M, Polyzou A, Ledderose J, van Diepen M, Holzhütter HG, Trimbuch T, Gimber N, Schmoranzer J, Lieberam I, Rosenmund C, Spahn C, Scheerer P, Szczepek M, Leondaritis G, Eickholt BJ (2019)
The Axonal Membrane Protein PRG2 Inhibits PTEN and Directs Growth to Branches.
Cell Rep 29: 2028-2040.e8
Wu T, Duan F, Yang W, Liu H, Caballero A, Fernandes de Abreu DA, Dar AR, Alcedo J, Ch'ng Q, Butcher RA, Zhang Y (2019)
Pheromones Modulate Learning by Regulating the Balanced Signals of Two Insulin-like Peptides.
Neuron 104: 1095-1109.e5
Pérez-Brangulí F, Buchsbaum IY, Pozner T, Regensburger M, Fan W, Schray A, Börstler T, Mishra H, Gräf D, Kohl Z, Winkler J, Berninger B, Cappello S, Winner B (2019)
Human SPG11 cerebral organoids reveal cortical neurogenesis impairment.
Hum Mol Genet 28: 961-971
Kalamakis G, Brüne D, Ravichandran S, Bolz J, Fan W, Ziebell F, Stiehl T, Catalá-Martinez F, Kupke J, Zhao S, Llorens-Bobadilla E, Bauer K, Limpert S, Berger B, Christen U, Schmezer P, Mallm JP, Berninger B, Anders S, Del Sol A, Marciniak-Czochra A, Martin-Villalba A (2019)
Quiescence Modulates Stem Cell Maintenance and Regenerative Capacity in the Aging Brain.
Cell 176: 1407-1419.e14
Kang E, Song J, Lin Y, Park J, Lee JH, Hussani Q, Gu Y, Ge S, Li W, Hsu KS, Berninger B, Christian KM, Song H, Ming GL (2019)
Interplay between a Mental Disorder Risk Gene and Developmental Polarity Switch of GABA Action Leads to Excitation-Inhibition Imbalance.
Cell Rep 28: 1419-1428.e3
Wong FK, Marín O (2019)
Developmental Cell Death in the Cerebral Cortex.
Annu Rev Cell Dev Biol 35: 523-542
Llorca A, Ciceri G, Beattie R, Wong FK, Diana G, Serafeimidou-Pouliou E, Fernández-Otero M, Streicher C, Arnold SJ, Meyer M, Hippenmeyer S, Maravall M, Marin O (2019)
A stochastic framework of neurogenesis underlies the assembly of neocortical cytoarchitecture.
Elife 8